Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0548 ATGAAGAGGAGCAGAGATATGGAGAAGAGATCAGAGATAAGCTCTGCCATTGAAGAGTTATCAATGATGGTTATAGTTAAGCCTGATGGAAATCATGAAGTTGCACACATACCTATCAAGCCTTTCTTATCTCTATGTCACTTGGTTCTACAAGTTATTGATAAGGTAGGACCATCAATGGCGGTTTTGAGACAAGATGTTCACCTCAATATTAAGAAATTGGAAGTGATGTATGAATCAAACCCATCAATGAATTCAAATTTGGTTGAGATATTGAAATCAGAAGCTAGCAATGGCACTTCAAGGAAGAGGTGTAGCTGCAGTAAAGCCTTTGTTTGGCTTACTAGATCCCTGGATTTCTCCTCAAAATTGTTACAAGGATTAGCAAATGATCCTAAAAATAATATGAAGCAAATAGTTGAAGAGTCTTATGCTGAAACTTTGGCACCATGGCATGGATGGATTTCATCAGCTGCTTCCAAAGTGGCTCTAAAACTAGTTCCAGATGATAAAACTTTCATGGACCTCCTAAGGGAAAAAGATGGAAACTGTGATACCCTAAAGGAGAAAATGCAGAAGTTGACTTCTTTGATGGTGCCTTTTCTTGAGGATATCCATTCTATTATAGTAAGATTAGTTTCATGCTTTCTCACGAACAAAGATATAAAGTTTATAACTTGGACAGGCTTAAGTCAACTTGAAGTCAAGATAGAGTAA 717 0.3696 MKRSRDMEKRSEISSAIEELSMMVIVKPDGNHEVAHIPIKPFLSLCHLVLQVIDKVGPSMAVLRQDVHLNIKKLEVMYESNPSMNSNLVEILKSEASNGTSRKRCSCSKAFVWLTRSLDFSSKLLQGLANDPKNNMKQIVEESYAETLAPWHGWISSAASKVALKLVPDDKTFMDLLREKDGNCDTLKEKMQKLTSLMVPFLEDIHSIIVRLVSCFLTNKDIKFITWTGLSQLEVKIE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0548 238 SUPERFAMILY Glycolipid transfer protein, GLTP 35 209 IPR036497 -
Lal21g0548 238 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 4 210 - -
Lal21g0548 238 Coils Coil 177 197 - -
Lal21g0548 238 Pfam Glycolipid transfer protein (GLTP) 37 178 IPR014830 GO:0005737|GO:0120009|GO:0120013
Lal21g0548 238 Gene3D Glycolipid transfer protein 1 211 IPR036497 -
Lal21g0548 238 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 4 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0548 Lal-Chr21 4002245 4004934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0548 12 205 Acyl Lipid Metabolism Gene Families AT2G34690 21.538 1.10e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0548 - - gmx:100527808 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0548 21 4002245 4004934 Lal21g0548 21 4002245 4004934 ECH
Lal17g0528 17 3687473 3689522 Lal21g0548 21 4002245 4004934 LSH