Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0528 ATGGAGAAGAACTCAGAGATAAGCTCTGCCATTGAAGAAGTGTCAATGATGGTTATAGTTAAACCTGGTGGAAATCATGAAACTGCACACATCCCTACAAAGCCATTCTTATCTCTATGTTACTTGGTTCTACAAGTTCTTGATAAGATAGGACCAGCCATGGCTGTTTTGAGACAAGATGTTCACCAGAATATTAAGAGATTGGAATCGATGCATGAAACAAATTCATCAATGAACTCAAATTTGGTTGAGATATTGAAATCAGAAGCTAGCAAAGGCAACATGGGGAAGAGATGCAGCTGCAGTAAAGCCTTTGTTTGGCTTACTAGATCCTTGGATTTCACCGCTGCGTTATTACATAGACTAGCAAAAGATCCTATCAAGAATATGGAGCAAGTAGTTGAAGAGTCTTATGCTTCAACTTTGGCACCATTTCATGGATGGATTTCATCAGCTGCTTTCCATGTGGCTCTAAAACTAGTGCCAGATAGTAAAACTTTCATGGACCTCCTAAGAGAAAAGGATGAAAACTATGATACCCTAAAGGACAAAATGCAGATAATGGTTTCTTTGCTTGTACCTTTTCTTGAAGATATCCATTGTATTATAGAAGCGTATAACTTGGACAGGTTTAAGTCAACATGA 645 0.3814 MEKNSEISSAIEEVSMMVIVKPGGNHETAHIPTKPFLSLCYLVLQVLDKIGPAMAVLRQDVHQNIKRLESMHETNSSMNSNLVEILKSEASKGNMGKRCSCSKAFVWLTRSLDFTAALLHRLAKDPIKNMEQVVEESYASTLAPFHGWISSAAFHVALKLVPDSKTFMDLLREKDENYDTLKDKMQIMVSLLVPFLEDIHCIIEAYNLDRFKST 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0528 214 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 1 211 - -
Lal17g0528 214 SUPERFAMILY Glycolipid transfer protein, GLTP 27 210 IPR036497 -
Lal17g0528 214 Gene3D Glycolipid transfer protein 1 210 IPR036497 -
Lal17g0528 214 Pfam Glycolipid transfer protein (GLTP) 31 172 IPR014830 GO:0005737|GO:0120009|GO:0120013
Lal17g0528 214 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 1 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0528 Lal-Chr17 3687473 3689522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0528 6 175 Acyl Lipid Metabolism Gene Families AT2G34690 21.637 3.77e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0528 - - gmx:100527808 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0528 17 3687473 3689522 Lal17g0528 17 3687473 3689522 ECH
Lal17g0528 17 3687473 3689522 Lal21g0548 21 4002245 4004934 LSH