Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0547 ATAGCTGTCCTATCTCAAATTGCGTTTTCTATAAGCATCAAAAGCAAACATAATTGTCTACTGTTGCCCGAATATGTTAATTCTACGTGTTGCATCTTCAAGCTGAAGAGTGTTGAGTCAACTAGCAGATCAGGGAATCTGTGGCCCATAAACATAGGTGTGGAGTCTACAGGAACTATTAGCTGGACAGTTTTCAGTTCAAGTATATTTGTCCTTGTTGCTCTTGTTCTCTCCATGTATCTAATATTCGAGCATTTAGCTGCCTATAATCAGCCCGAGGAGCAGAAGTTTTTGATTGGTCTCATTTTAATGGTTCCTGTTTATGCATTGGAATCGTTTTTGTCACTATTGGATTCCGGTGCAGCATTCAACTGTGAAATTATCCGGGATTGCTATGAGGCTTTTGCATTATATTGCTTTGAAAGATACTTGATAGCTTGCTTAGGTGGTGAGGATAAAACAATTCAATTTATGGAGACTTTGAGCCTAACAGACTCAAGCACTCCTCTGCTGAAAGAAGCATATGCGTATGGAATTGTAGAGCATCCTTTTCCCTTAAATTGCTTGTTAAGAGATTGGTATCTTGGCCCTGACTTCTATCAATCTGTGAAAATTGGCATTGTACAATATATGATACTGAAAATGATCTGTGCATTGCTGGCAATGATCCTCCAGTCTTTTGGGGTTTATGGAGAAGGGAAGTTTGAATGGAAGTATGGGTATCCCTACTTGGCATGTGTTCTCAATTTTAGTCAGACATGGGCCCTGTATTGCCTTGTACAGTTCTACAGTGTCATTAAAGATAAATTGGAGCCTATCAAACCATTGGCAAAGTTTCTAACTTTTAAGTCAATCGTGTTCTTGACATGGTGGCAAGGCGTGGCTGTTGCATTTCTTTTTTCTATGGGAGCATTTAGAGGGTCACTGGCCCAGGAGCTGAAAACACGTATACAAGACTACATCATTTGTATAGAGATGGGGGTTGCTGCTGTTGTGCACCTGTATGTCTTTCCTGCAGTACCTTACAAAAGGGGTGAGAGGTGTGTCCGCAATGTAGCGGTGATGGCCGACTATGCATCAATAGGGACATCTCCTGATCCTTTAGAGGTTCAAGACTGTGAGCGCTCTACTAGAATGCGGGTGGGTCGACATGATGAGAGAGAGAAGCATAAATTTTCCCATAATGTCCGGGATGTGGTTATTGGAAGTGGTGAAATTATTGTTGATGACATGAAATATACAGTTTCACACGTGGTAGAACCTGTTGAAAGGGGTATTGCAAAGATAAACAAAACCTTCCATGAGATATCAGAGAACGTGAAACGCCACGACGAGGAGCGGAGAAGAAGCAACAAAATAAAGGATGATAGTTACCTTATCCCCTTACATTCACGGACTGCAGAATTTTCTGATGCTCACGATGGACTAGTAGAAGGAAGTGTTAGTGATAGTGGTTTGTCTGGTGGAAAGAGACAACTTAACCAAACCAAAGCATCAACATCAAGGATGAGAAGATAG 1518 0.4124 IAVLSQIAFSISIKSKHNCLLLPEYVNSTCCIFKLKSVESTSRSGNLWPINIGVESTGTISWTVFSSSIFVLVALVLSMYLIFEHLAAYNQPEEQKFLIGLILMVPVYALESFLSLLDSGAAFNCEIIRDCYEAFALYCFERYLIACLGGEDKTIQFMETLSLTDSSTPLLKEAYAYGIVEHPFPLNCLLRDWYLGPDFYQSVKIGIVQYMILKMICALLAMILQSFGVYGEGKFEWKYGYPYLACVLNFSQTWALYCLVQFYSVIKDKLEPIKPLAKFLTFKSIVFLTWWQGVAVAFLFSMGAFRGSLAQELKTRIQDYIICIEMGVAAVVHLYVFPAVPYKRGERCVRNVAVMADYASIGTSPDPLEVQDCERSTRMRVGRHDEREKHKFSHNVRDVVIGSGEIIVDDMKYTVSHVVEPVERGIAKINKTFHEISENVKRHDEERRRSNKIKDDSYLIPLHSRTAEFSDAHDGLVEGSVSDSGLSGGKRQLNQTKASTSRMRR 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0547 505 MobiDBLite consensus disorder prediction 485 505 - -
Lal21g0547 505 MobiDBLite consensus disorder prediction 480 505 - -
Lal21g0547 505 Pfam Organic solute transporter Ostalpha 65 342 IPR005178 -
Lal21g0547 505 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 38 494 IPR005178 -
Lal21g0547 505 PANTHER ORGANIC SOLUTE TRANSPORTER SUBUNIT ALPHA-RELATED 38 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0547 Lal-Chr21 3994821 3998917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0547 - - gmx:100804401 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0547 21 3994821 3998917 Lal21g0547 21 3994821 3998917 ECH
Lal17g0526 17 3663777 3670319 Lal21g0547 21 3994821 3998917 LSH