Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0526 ATGGGTTTGACAGATATTCTATGTTGTTCCATATTTTTTTCCACCCTAGTTGAGTCAACTAGTAGGTCAGTGACTGTATGGCCGATAAACATAGGTGTGGAGTCTACAGGAACTATTAGCTGGACAGTTTTCAGTTCAAGTATATTTGTGCTTGTTGCTCTTGTTCTCTCCATGTATCTAATATTCGAGCATTTAGCTGCCTATAATCAGCCCGAGGAGCAGAAGTTTTTGGTTGGTCTCATTTTAATGGTTCCTGTTTATGCATTGGAATCGTTTTTGTCACTATTGAATTCCAGTGCAGCATTCAACTGTGAAGTTATCCGGGACTGCTATGAAGCTTTTGCATTATATTGCTTTGAAAGATACTTGATAGCTTGCTTAGGCGGTGAAGACAAAACAATTCAATTTATGGAAAGTATGTGCCTAACAGACACAAGCACTCCTCTGCTGAAAGAATCATATTCGTATGGAATTGTAGAGCACCCGTTTCCCTTAAATTGCTTGTTAAGAGTTTGGTATCTTGGCCCTGACTTTTATCAATCTGTGAAAATTGGCATCGTACAATATATGATACTGAAAATGATCTGTGCATTGCTGGCAATGATCCTCCAGTCTTTTGGGGTTTATGGAGAGGGAAAATTTGAATGGAAATATGGGTATCCCTACTTGGCTTGTGTTCTCAGTTTTAGTCAGACATGGGCCATGTATTGCCTCGTACAGTTCTATTCTGTCACTAAAGATAGATTGGAGCCTATCAAACCATTGGCGAAGTTTCTAACTTTCAAGTCAATTGTGTTCTTGACATGGTGGCAAGGTGTGGCTGTTGCATTTTTTTTTTCTATGGGAGCATTTAAAGGGTCACTGGCACAGGAGCTTAGAACGCGTATACAAGACTACATCATTTGTATAGAGATGGGGGTTTCTGCTGTTGTTCATCTGTATGTCTTTCCCGCAGTGCCTTACAAAAGGGGTGAAAGGTGTGTCCGCAATGTAGCGGTGATGGCTGACTATGCCTCAATAGGGGCACCTCCTGATCCTGCTGAGGTTCAAGACTGTGAACGCTCAACTAGAATGTGGGTGGGTCGACACAATGAGAGAGAGAAGCGTAAATTTACCCATAATGTCCGTGATGTGCTTCTCGGAAGTGGTGAAATTATTGTTGACGACATGAAATTTACAGTTTCGCACGTGGTAGAACCTGTTGAAAGGGGTATTGCAAAGTTAAACAAAACCTTCCATCAGATATCAGAGAATGTTAAACGCCTTGATGAGGAGCGGAGGAGAAGCAACAAGGTCAAGGATGATAGTTTTCTTATTCCGATGCATTCATGGACTGCAGAATTTTCTGATGCACATGATAAACTAGTGGAAGGAAGTGTCAGTGATAGTGGTTTGTCTGGTGGAAAGAGACAACATAACCAATCCAACGCATCTGGGTCGAGGATGAGAAGATAG 1455 0.4151 MGLTDILCCSIFFSTLVESTSRSVTVWPINIGVESTGTISWTVFSSSIFVLVALVLSMYLIFEHLAAYNQPEEQKFLVGLILMVPVYALESFLSLLNSSAAFNCEVIRDCYEAFALYCFERYLIACLGGEDKTIQFMESMCLTDTSTPLLKESYSYGIVEHPFPLNCLLRVWYLGPDFYQSVKIGIVQYMILKMICALLAMILQSFGVYGEGKFEWKYGYPYLACVLSFSQTWAMYCLVQFYSVTKDRLEPIKPLAKFLTFKSIVFLTWWQGVAVAFFFSMGAFKGSLAQELRTRIQDYIICIEMGVSAVVHLYVFPAVPYKRGERCVRNVAVMADYASIGAPPDPAEVQDCERSTRMWVGRHNEREKRKFTHNVRDVLLGSGEIIVDDMKFTVSHVVEPVERGIAKLNKTFHQISENVKRLDEERRRSNKVKDDSFLIPMHSWTAEFSDAHDKLVEGSVSDSGLSGGKRQHNQSNASGSRMRR 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0526 484 PANTHER ORGANIC SOLUTE TRANSPORTER SUBUNIT ALPHA-RELATED 10 473 - -
Lal17g0526 484 MobiDBLite consensus disorder prediction 459 484 - -
Lal17g0526 484 Coils Coil 405 425 - -
Lal17g0526 484 MobiDBLite consensus disorder prediction 464 484 - -
Lal17g0526 484 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 10 473 IPR005178 -
Lal17g0526 484 Pfam Organic solute transporter Ostalpha 44 321 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0526 Lal-Chr17 3663777 3670319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0526 - - gmx:100804401 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0526 17 3663777 3670319 Lal17g0526 17 3663777 3670319 ECH
Lal17g0526 17 3663777 3670319 Lal21g0547 21 3994821 3998917 LSH