Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0483 ATGAGGGTTTTGGGAACGGAGATCGTGTTCGCCTTGTTGCTATGTGTGATCCTCTCATGCTCCGCCGAATCGCATGGTGGTAGGGTTTCTATCCACGCCGTGTGTCGTAGAGAATCGGTTTTAGATTTCATATTAGGGTTTTCAGATTCCACCTGCTTAACCCCCGATTCTCCTCCATCCTTTCGTTATATTGGTGTCACCGAGGGAGATGAGGTTTCATTCCAGAAGGCGCTAAACATGGTTCACAAGAATAAGCATGAGTATGTAGCTGTACTTTTCTATGCATCATGGTGCCCTTTCTCTCGTATATTTAGACCAGTTTTCTCAATCATGTCATCCCTCAGTCCTTCCATTCCACATCTTGCTATTGAAGAATCATCTGTCAGGCCAAGCACCCTGTCAAAATACGGTGTCCATGGTTTCCCCAGTCTATTCATTTTGAATTCTACCATGCGTTTTCGTTACTACGGATCTCGGACCCTTGGCTCTCTTATAGGTTTCTACAGTGATGTTACTGGGATCAGGATTGATTCACTTGATCAACTCTCCCTTGAGAAGATTGGGCTTTTGTCAGTTCACGAGAAGCACAATAACACTGAGCCAGAAAATTGCCCATTTTCATGGGCTAGATCTCCAGAAAATTTACTGAGGCAGGAGACGTATTTGGCTCTGGCCACTGCATTTGTGGTTTTGAGACTACTCTACTTATTTTTTCCTACACTGCTTATTTGTATTCAATATACTTGGAGAAGGGCCATCCAAAATGTTAGATTAGGGAGCTTGCTGGAACATCCTTTGTTATATCTTAAACGAATGATACAGTCATTTAAATGTTTGGAAGAGCCATGCAAGAGAAGTAATCTGCAGGAAGGAGCGATGAATGCTAAAGCATGGGCTTCCAAGTCCCTTGCCACTGTTTCAATTGGAGAAGGAAGCACCAGCCGTGGATGCACCAGTAAGTAG 963 0.4382 MRVLGTEIVFALLLCVILSCSAESHGGRVSIHAVCRRESVLDFILGFSDSTCLTPDSPPSFRYIGVTEGDEVSFQKALNMVHKNKHEYVAVLFYASWCPFSRIFRPVFSIMSSLSPSIPHLAIEESSVRPSTLSKYGVHGFPSLFILNSTMRFRYYGSRTLGSLIGFYSDVTGIRIDSLDQLSLEKIGLLSVHEKHNNTEPENCPFSWARSPENLLRQETYLALATAFVVLRLLYLFFPTLLICIQYTWRRAIQNVRLGSLLEHPLLYLKRMIQSFKCLEEPCKRSNLQEGAMNAKAWASKSLATVSIGEGSTSRGCTSK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0483 320 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 4-RELATED 7 317 - -
Lal21g0483 320 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 4-RELATED 7 317 IPR044606 -
Lal21g0483 320 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Lal21g0483 320 ProSiteProfiles Thioredoxin domain profile. 52 192 IPR013766 -
Lal21g0483 320 Gene3D Glutaredoxin 65 170 - -
Lal21g0483 320 SUPERFAMILY Thioredoxin-like 83 172 IPR036249 -
Lal21g0483 320 CDD PDI_a_ERp44_like 69 168 - -
Lal21g0483 320 Pfam Thioredoxin 75 165 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0483 Lal-Chr21 3438314 3441239 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0483 - - gmx:100815032 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0483 21 3438314 3441239 Lal21g0483 21 3438314 3441239 ECH
Lal17g0410 17 2759692 2762513 Lal21g0483 21 3438314 3441239 LSH