Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0410 ATGAGGGTTTGGGGAACGGAGATCGTGTTCGCCTTGTTGTTATGCGGGACCCTCTCCTTCTCCGCCGAATCCCACCGTGGTACGGCTTCTCCTACCGCCGTGTGTCGCAGGGAATCGGTTTTTGATTTCATATTAGGGTTTTCAGATTCCACATGCTTAACCCCCGATTCTCCTCCATCATTTCGTTATATTGGTGTCACCGAGGGAGGTGAAGGTTCTTTGCAGAAGGCGCTAAACATGGTTCACAAGAATAGTCATGAGTATGTAGCTGTACTTTTCTTTGCATCATGGTGCCCTTTCTCTCGGATACTTAGACCAGATTTCTCAATCATGTCGTCCCTTAATCCTTCCATTCCACATCTTGCTGTTGAAGAATCATCTGTAAGGCCAAGCACCCTGTCAAAATACGGTGTCCATGGTTTCCCTACACTATTCATTTTGAATTCTACCATGCGCGTCCGTTACCATGGATCCCGGACCCTTAGCTCTCTTATAAGTTTCTACAGTGATGTTACTGGTGTCAGGATTGATTCACTTGATCAACTATCCCTTGAGAAAATTGGGCGTCTTTCCGTTCGTGAGAAGAACAGTAACACTGAGCCTGAAAGTTGCCCATTTTCATGGGCTAGGTCTCCAGAAAATTTACTGAGGCAGGAGACTTATTTGGCTCTAGCCACTGCATTTGTGGTTTTGAGGCTACTCTACTTATGTTTTCCTACACTGCTTATTTGTATTCAATATGTTTGGAGAAGAGTCATCCAAAATGTTACATTTGGGAGCTTGTTGGAACATCCTTCAGTATATCTGAAGCGATTGGTACAGTCATTTAAGTGTTTGAATGAGCCATGCAAGAGAAGTAATCTGCAGGAAGGAGCAATGAATGCTAAGGCATGGGCTTCCAAGTCTCTTGCCACTACTGTTTCAATTGGAGAGGGAAGTACCAGCCGGGGATGCACCAGTAAGTAG 966 0.4503 MRVWGTEIVFALLLCGTLSFSAESHRGTASPTAVCRRESVFDFILGFSDSTCLTPDSPPSFRYIGVTEGGEGSLQKALNMVHKNSHEYVAVLFFASWCPFSRILRPDFSIMSSLNPSIPHLAVEESSVRPSTLSKYGVHGFPTLFILNSTMRVRYHGSRTLSSLISFYSDVTGVRIDSLDQLSLEKIGRLSVREKNSNTEPESCPFSWARSPENLLRQETYLALATAFVVLRLLYLCFPTLLICIQYVWRRVIQNVTFGSLLEHPSVYLKRLVQSFKCLNEPCKRSNLQEGAMNAKAWASKSLATTVSIGEGSTSRGCTSK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0410 321 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 4-RELATED 1 318 IPR044606 -
Lal17g0410 321 Gene3D Glutaredoxin 71 178 - -
Lal17g0410 321 ProSiteProfiles Thioredoxin domain profile. 52 192 IPR013766 -
Lal17g0410 321 CDD PDI_a_ERp44_like 74 168 - -
Lal17g0410 321 Pfam Thioredoxin 83 167 IPR013766 -
Lal17g0410 321 SUPERFAMILY Thioredoxin-like 83 172 IPR036249 -
Lal17g0410 321 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 4-RELATED 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0410 Lal-Chr17 2759692 2762513 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0410 - - gmx:100815032 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0410 17 2759692 2762513 Lal17g0410 17 2759692 2762513 ECH
Lal17g0410 17 2759692 2762513 Lal21g0483 21 3438314 3441239 LSH