Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0425 ATGCAACAATGCAGTAGGACTCTTTTCAATTTGCGACTGTGTATGAGTGTCTTCATCGATCGACTTTTGTTGCATACTTGCAATGCAGGGAATTCGTTAACGGCGACGACACACATAATAACGGTTGTGGTGGGGGCAGGAGTGTTAGCTCTAGCATGGGCAATGGCTCAGCTTGGTTGGATTGCAGGCATAGCCATTATGGTTGCATTTGCATGCATTTCTATTTACACTTACAATCTCATTGCTGATTGCTATAGATATCCTGACCCTGTTACTGGCAAGAGAAACTACACTTACATGCAAGCTGTAGGATCATACTTAGGTAAAACAATGCATTTGATTTGTGGATTGGTCCTATATGGGAAGCTTGCTGGTGTTACAGTGGGCTACACAATAACTACTTCAACAAGCTTGGTGGCTATAAAGAAAGCGATATGCTTCCATTATAAGGGCCATGAAGCTTATTGCAAGTTTTCAAATAATCCATATATGATAGCTTTTGGTGTTGTGCAAATTTTCTTGTCCTTGATCCCAAACTTCCACAAATTAACATGGCTCTCAACCATTGCTGCTATCACTTCTTTTGGTTATGCATTCATTGGAAGTGGCCTTTCACTTGCAATAGTGGCCCAAGGGAAAGGTGAACCAACTAGTTTATCAGGAATCAGAGTAGGGCCAGGATTATCATCAGAAGATAAAATGTGGAGGATTTTCAGTGCTCTAGGAAACATAGCACTTGCTAGTTCTTTTGCTACTGTTGTTTATGATATAATGGATACATTGAAGTCATATCCACCAGAAAACCAACAGATGAAAAAGGCCAATGTGTTAGGGATCACAACAATGACAATTCTGTTCCTCCTCTGTGGTGGACTTGGCTATGCTGCTTTCGGTGATGACACTCCGGGGAACATCCTCACTGGCTTCGGATTTTACGAGCCCTTCTGGTTGGTTGCCCTGGGGAATGTCTGCATTGTGATCCACATTGTGGGAGCATATCAGTTGATGGCTCAACCATTATTTCGTGTAGTTGAGATGGGTGCTAATATTATGTGGCCACATTCAGATTTCATAAACAAAGAACACTCATTCAAATTGGGAAGTTTCAACTTATTTAGGCTAGTTTGGAGGACAATATTTGTGATAGTAGCCACAATAGTTGGCATGGCAATGCCATTTTTCAATGAGTTCCTTGCTCTGCTAGGAGCAATTGGGTTTTGGCCACTTATTGTTTTCTTCCCTATACAAATGCACATTGCCCAGAAAAGCATAAAAAAGACCTCATTGAAGTGGTTTATTCTCCAATTATTGAGCTTCATATGTTTGCTAGTTTCATTGGCTGCTGCAGTTAGTTCCATTCGTGGAATTGCTATGAATATCAACAAATATAAGATCTTTCAATACAAACAATAA 1413 0.4048 MQQCSRTLFNLRLCMSVFIDRLLLHTCNAGNSLTATTHIITVVVGAGVLALAWAMAQLGWIAGIAIMVAFACISIYTYNLIADCYRYPDPVTGKRNYTYMQAVGSYLGKTMHLICGLVLYGKLAGVTVGYTITTSTSLVAIKKAICFHYKGHEAYCKFSNNPYMIAFGVVQIFLSLIPNFHKLTWLSTIAAITSFGYAFIGSGLSLAIVAQGKGEPTSLSGIRVGPGLSSEDKMWRIFSALGNIALASSFATVVYDIMDTLKSYPPENQQMKKANVLGITTMTILFLLCGGLGYAAFGDDTPGNILTGFGFYEPFWLVALGNVCIVIHIVGAYQLMAQPLFRVVEMGANIMWPHSDFINKEHSFKLGSFNLFRLVWRTIFVIVATIVGMAMPFFNEFLALLGAIGFWPLIVFFPIQMHIAQKSIKKTSLKWFILQLLSFICLLVSLAAAVSSIRGIAMNINKYKIFQYKQ 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0425 470 Pfam Transmembrane amino acid transporter protein 32 456 IPR013057 -
Lal21g0425 470 PANTHER OS05G0424000 PROTEIN-RELATED 28 465 - -
Lal21g0425 470 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 28 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0425 Lal-Chr21 2941728 2944075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0425 30 467 Organic Solute Cotransporters AT1G10010 54.853 8.87e-180 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0425 K24917 - gmx:100781934 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0332 17 2108828 2112885 Lal21g0425 21 2941728 2944075 LSH