Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0332 ATGAGAAAGGAGGTGATGGAGGTGGAAAATGGTACTAATCCATATCCGAGTGATCTTTACGACGATGATGGGAGGCTCAAAAGAACAGGGACAGTATGGACAGCATTTGCACATGTAATAACAGGAGTAATAGGAGCTGGTGTGTTATCTTTAGCATGGGCCATGTCCCAATTGGGATGGTTCCTTGGAATACTTAGTATTGTTCTCTTTTCTGCTATTACTCTCTACACTGCCAATCTTCTTGCTGATTGTTATAGATCACCTAACCCTGTCACTGGCAAAAGGAATACCACTTATATGGATGCTGTTCAAGTTCACTTAGGTGGAAAAATGCATGTGTATTGTGGAGTAGTTCAATATGGCATGCTTGCTGGCTATGGAATTGGTTACACAATAACTACAGCTTTAAGTGTGGTGACTATACTGAAAAACGGTTGCATGGCAAAGAATGGGATTGAAGCTCCATGTAGATACTCTTTTAATCCATACATGATTTCTATGGGAATAATTGAAATAATATTTTCACAAATTCCCAATTTTCACGAGCTGGCTTGGCTCTCAGTCCTAGCAGCGATAATGTCTTTTGCTTACTCATTTATTGGTGTTGGACTTTCAATTGCAACAGTTATCCAAGGGAAAGGAGTTAAAACATATTTATTTTGGAACACCCAGAAGCATGTTACAGGAGAGGATATATGGAATAAGCTAGCTGCACTTGGAAACATTGCACTTGCTAGTGCCATTGCTCAAATTTCAATAGACATACAAGATAGTTTAAAGTCATCACCAGCAGAAAATAAGGTGATGAAGAAAGCAAATGTTATAGCTATATCAACCATGACACTTATCTTTCTCTTATCTTCATGCGCTGGATATGCTGCATTTGGACCAGACACACCTCCCAACATTCTCATGAGCACTGGATTTCACAAGCCAGTGTGGCTTGTTGACTTAGCCAATATCTTCATTATTGTACACCTTATTGGCGCATATCAGGTACTTATCCAACCATTTTATCATATAGTGGAAATATTGGCTAGTAAAAGGTGGCCAAACTCAAGTTTTATAACAAAGGAGTACCCTGTGAAGATTGGAAAGATGAGAACCAGCATGAATTTATTTAGGTTAGTTTGGAGGACTACATTTGTGGTTCTGGCAACTGTGCTAGCCATGGCACTACCTTTTTTCAATTACATGCTTTCCCTTCTTGGTGCAATTGGATTCTGGCCTTCAACTATATATTTTCCAGTGGAAATGTATATAGTGAGAAAGAAGATCAGAAAAGGGTCATTGAGATGGATTGGACTTCAAACTTTGAGCCTTGTGTGCTTCCTTGTGTCCTTGATAGCAGCATGTGGAGCCATTGAAGGGTTGAGTAAAGCTGTTGGTAAATACAAGCCCTTTATGTATAAGGAATAG 1419 0.3925 MRKEVMEVENGTNPYPSDLYDDDGRLKRTGTVWTAFAHVITGVIGAGVLSLAWAMSQLGWFLGILSIVLFSAITLYTANLLADCYRSPNPVTGKRNTTYMDAVQVHLGGKMHVYCGVVQYGMLAGYGIGYTITTALSVVTILKNGCMAKNGIEAPCRYSFNPYMISMGIIEIIFSQIPNFHELAWLSVLAAIMSFAYSFIGVGLSIATVIQGKGVKTYLFWNTQKHVTGEDIWNKLAALGNIALASAIAQISIDIQDSLKSSPAENKVMKKANVIAISTMTLIFLLSSCAGYAAFGPDTPPNILMSTGFHKPVWLVDLANIFIIVHLIGAYQVLIQPFYHIVEILASKRWPNSSFITKEYPVKIGKMRTSMNLFRLVWRTTFVVLATVLAMALPFFNYMLSLLGAIGFWPSTIYFPVEMYIVRKKIRKGSLRWIGLQTLSLVCFLVSLIAACGAIEGLSKAVGKYKPFMYKE 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0332 472 Pfam Transmembrane amino acid transporter protein 28 455 IPR013057 -
Lal17g0332 472 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 19 466 - -
Lal17g0332 472 PANTHER OS05G0424000 PROTEIN-RELATED 19 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0332 Lal-Chr17 2108828 2112885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0332 16 468 Organic Solute Cotransporters AT1G58360 52.838 9.86e-171 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0332 K24917 - gmx:100804643 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0332 17 2108828 2112885 Lal17g0332 17 2108828 2112885 ECH
Lal17g0332 17 2108828 2112885 Lal21g0425 21 2941728 2944075 LSH