Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0418 ATGTCTTCCTCCGTCGAGACGGGGATGGAGCCACTAACATCAGGGGCGAGCAACCGTATAATCCCAATTCTGAAAGCGCTTAGGGCTTCTTTGATGTTCGTCTACACATTCTTCATCTCGTTCCTCCTTTTCATTCTCCCTCGCCGTCGCCGCCTCTCACCGGCGTCGGAGATTCCGCCTCCGTCGCCGAGGAAGTATTTGAAGAGGCGGTGGTTGATTAGGGAAGAGGAGGATACATTTAGAAGAAGAGCGTTGGCACAAGATGTTGGAATGGGACCTGATGACCGGTGCTGCCGGTGGAACACTTCTATCTTCTATGGACTAAGAAACAATGCTCTCTTTTGCCGTTCATGGTTTCCGGTCACCGGTCATCTTAAGGGCATTTTGATCATCATTCATGGGCTTAACGAACACAGTGGAAGATATGCCGACTTCGCAAGGCAGTTAACATCACGCCATTTTGGTGTCTATGCAATGGACTGGATAGGTCATGGAGGGAGTGATGGCTTGCACGGTTATGTTCCTTCTCTTGATCATGTCGTTGCAGACACAGGAGCTTTCTTGGAAAAGGTTAAATCAGAGAATCCAGGGATACCATGCTTTCTCTTTGGTCACTCTACTGGAGGGGCTGTGGTTTTGAAAGCAGCTTCCCTCCCTCATATTGAAGTAATGGTGGAAGGAATTATACTAACCTCACCTGCTTTGCGAGTCAAGCCAGCTCATCCAATTGTTGGTGCTGTTGCTCCAATTTTTTCTCTGGTAGCTCCGAAGTTCCAATTTAAAGGAGCAAACAAAAGGGGAATTCCAGTTTCTAGGGACCCGGAGGCTTTGTTGGCCAAGTACTCTGATCCTTTGGTCTACACAGGACCTATAAGGGTCCGAACCGGCCATGAAATACTACGGATATCTTCTTACTTAATGCGGAACTTCAAGTCTGTGACAGTGCCATTCTTTGTCCTGCATGGAACTGCTGATAAGGTAACTGATCCACTGGCCTCAGAAGATCTATACAACAAAGCAGCTTCAGAATTCAAAGACATAAAGCTTTACAATGGCTTCTTGCACGACCTTCTGTTCGAGCCTGAGCGTGAAGAGATAGCTCAGGACATTATCAACTGGATGGAGAAGAGATTATTTGCTATTTGA 1146 0.4712 MSSSVETGMEPLTSGASNRIIPILKALRASLMFVYTFFISFLLFILPRRRRLSPASEIPPPSPRKYLKRRWLIREEEDTFRRRALAQDVGMGPDDRCCRWNTSIFYGLRNNALFCRSWFPVTGHLKGILIIIHGLNEHSGRYADFARQLTSRHFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKVKSENPGIPCFLFGHSTGGAVVLKAASLPHIEVMVEGIILTSPALRVKPAHPIVGAVAPIFSLVAPKFQFKGANKRGIPVSRDPEALLAKYSDPLVYTGPIRVRTGHEILRISSYLMRNFKSVTVPFFVLHGTADKVTDPLASEDLYNKAASEFKDIKLYNGFLHDLLFEPEREEIAQDIINWMEKRLFAI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0418 381 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 63 378 - -
Lal21g0418 381 Pfam Serine aminopeptidase, S33 124 362 IPR022742 -
Lal21g0418 381 Gene3D alpha/beta hydrolase 101 378 IPR029058 -
Lal21g0418 381 SUPERFAMILY alpha/beta-Hydrolases 112 378 IPR029058 -
Lal21g0418 381 PANTHER PHOSPHOLIPASE-RELATED 63 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0418 Lal-Chr21 2896095 2900096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0418 3 298 Acyl Lipid Metabolism Gene Families AT5G11650 69.205 1.79e-134 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0418 - K01054 gmx:100779245 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0418 21 2896095 2900096 Lal21g0418 21 2896095 2900096 ECH
Lal17g0326 17 2069405 2072837 Lal21g0418 21 2896095 2900096 LSH
Lal21g0418 21 2896095 2900096 Lal4g0023 4 153873 154932 LSH