Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0326 ATGTCTTCCTCCGTGGAGACGGGAATGGAACCGTTGACGTCAGGGGCAAGTAACCGCATAATCCCGATTCTGAAAGCGCTTAGGGCTTCTTTGATTTTCGTCTACACACTCTTCCTCTCATTCCTCTTGTTCGTTCTCCCTCGCCGTCGCCGCCTCTCATCGACGGTGGAGACACTACCGCCTCCGTCACCTAAGAAGAATTTCAAGAGGCGCTGGTTGATTAGAGAGGAAGAGGACACGTTCAGGAGAAGAACGTTGGCTCAACATGTTGGAATGGGACGGGATGACGGGTTCTGCCGGTGGAACACTTCTATCTTCTATGGACTCCGAAACAACGCTCTCTTTTGCCGTTCTTGGTTTCCGGTCACCGGTCATTTGAAGGGTATTCTTATCATCATTCATGGGCTTAATGAACACAGTGGAAGATATGCCGACTTTGCCCGGAAATTAACATCGTGCCACTTTGGTGTTTATGCAATGGACTGGATAGGTCATGGAGGGAGTGATGGATTGCATGGTTATGTTCCTTCTCTTGATTATGTGGTTGCAGACACTGGGGCTTTCTTGGTAAAGATTAGATCAGAGAATCCTGGGATACCATGCTTTCTCTTTGGTCATTCTACTGGAGGGGCTGTGGTTTTGAAAGCTGCTTCCCTCCCTCATATTGAAGTAATGGTGGAAGGGGTTATATTAACCTCACCTGCTTTGCGTGTGAGGCCAACTCATCCAATTGTTGGTGCTGTTGCGCCAATTTTTTCTCTGGTAGCTCCAAGGTTCCAAATTAAAGGAGCAAACAAAAGGGGCATTCCAGTTTCGAGGGATCCAGCAGCTTTGTTGGCAAAGTACTCTGATCCTTTGGTCTACACAGGACCTATAAGGGTCCGAACTGGCCATGAAATACTACGGATATCCTCTTTCTTAATGCGGAACTTGAAGTCTGTAACAGTGCCATTCTTTGTCCTGCATGGAACTGCTGATAAGGTAACTGATCCACTGGCCTCAGAAGAGCTATACAACAAGGCAGCTTCAGAGTTCAAAGACATAAAACTTTATGATGGCTTCTTGCACGACCTTCTATTCGAGCCCGAGCGTGAAGAGATAGCTCAGGACATTATCAACTGGATGGAGAAGAGATTATTTACTATTTGA 1149 0.4682 MSSSVETGMEPLTSGASNRIIPILKALRASLIFVYTLFLSFLLFVLPRRRRLSSTVETLPPPSPKKNFKRRWLIREEEDTFRRRTLAQHVGMGRDDGFCRWNTSIFYGLRNNALFCRSWFPVTGHLKGILIIIHGLNEHSGRYADFARKLTSCHFGVYAMDWIGHGGSDGLHGYVPSLDYVVADTGAFLVKIRSENPGIPCFLFGHSTGGAVVLKAASLPHIEVMVEGVILTSPALRVRPTHPIVGAVAPIFSLVAPRFQIKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSFLMRNLKSVTVPFFVLHGTADKVTDPLASEELYNKAASEFKDIKLYDGFLHDLLFEPEREEIAQDIINWMEKRLFTI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0326 382 Pfam Serine aminopeptidase, S33 125 363 IPR022742 -
Lal17g0326 382 Gene3D alpha/beta hydrolase 102 379 IPR029058 -
Lal17g0326 382 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 64 379 - -
Lal17g0326 382 PANTHER PHOSPHOLIPASE-RELATED 64 379 - -
Lal17g0326 382 SUPERFAMILY alpha/beta-Hydrolases 113 379 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0326 Lal-Chr17 2069405 2072837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0326 3 299 Acyl Lipid Metabolism Gene Families AT5G11650 68.212 2.56e-131 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0326 - K01054 gmx:100779245 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0326 17 2069405 2072837 Lal17g0326 17 2069405 2072837 ECH
Lal17g0326 17 2069405 2072837 Lal21g0418 21 2896095 2900096 LSH
Lal17g0326 17 2069405 2072837 Lal4g0023 4 153873 154932 LSH