Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0402 ATGTGTGGGTTGTTGAGAATGGAATGGATATGGGTATTGTTATCGTTGTTGTTGAGTTTTGCATCAACTTTGGTGTTTGTTTCAGGTGAGAGAGGGTTCATCATGAAAACAGAACAAGTTTCATGGTTCAATGTTACCAGAGAACCAGAACATGATTTCCTCACCAGAGCTTTTAATTTCTTATGGCAATCTGATGAATCAGGTTATCAACACGTGTGGCCGGATATGTGGGCGGCTGAGTACACGGTCCCCAACCTAATGAGGTCTAGGGAAGGTACATTTAGGGAAGAGGCTGTTTCCAGGCTGGATATTGAATTTGGGTGGAAAATTATTTTGGGTACTTTTATTGGATTTTGTGGAGCAGCTTTTGGAAGTGTAGGTGGTGTTGGTGGTGGTGGCATATTTGTTCCTATGCTTAGCCTCATTATTGGGTTTGATCCGAAATCATCCACAGCTATCTCAAAATGTATGATTATGGGCGCAGCTGGGTCAACTGCTTATTACAACCTTAAGCTAAGGCATCCTACACTTGACATGCCCATCATTGACTATGATTTGGCACTACTCATTCAACCAATGCTCATGCTCGGTATCAGCATTGGAGTGGTCTGCAATGTTGTATTTCCTGATTGGGTGGTCACTATTCTGCTTATTGTTCTCTTTTTCGGCACATCAACAAAGGCATTCTTTAGGGGTGTCGAAACATGGAAAAAGGAAACCATAATGAAAAAGGAGGCTGCTAGGCTACTAGAGACGAATGGTTATGGGGCTGAAGCAGAATACAAAACTATTCCTAGTGGACCAAATGGTAGCGCTGAAAATGATACCGAGGAAAAACCGGTGACTATTCTTGAAAATGTATACTGGAAGGAGTTTGGACTTCTTGTATTTGTTTGGGTTTCATTCCTTATACTACAAATTGCCAAGCAAAGCTTTACAACTACTTGTTCAACTGCATATTGGGTACTGAACTTGTTACAGATTCCTATCGCTATTGGAGTAACCGCGTATGAGGCTACTGCCTTGTTCAGTGGCCGGAGAGTAATTGCTTCCACTGGAGATCATGGGAAAAGTTTCACTGTTTCCCAGCTTGCTATCTATTGTTTTTTTGGTTTAATAGCTGGAATAGTTGGTGGCTTGCTAGGACTAGGAGGAGGATTTATTATGGGCCCACTCTTTCTGGAGCTGGGAGTCCCACCTCAGGTTTCAAGCGCCACTGCAACTTTTGCCATGACCTTCTCTTCATCTATGTCTGTTATAGAATACTACCTGCTGAAACGTTTTCCAGTTCCTTATGCTCTTTACCTCACTGTGGTGGCTACTATTGCAGCATTGGTTGGACAACATTTTGTGAGAAGGCTAATTATCATATTTGGGAGAGCATCACTTATCATATTTATTCTAGCCTCTACCATTTTTATCAGTGCAATCTCATTAGGTGGAGTTGGCATATCAAATATTGTATACAAGATTCAGAATCATGAATACATGGGATTTGATAATATCTGCAAGTACGGGTCATAA 1524 0.4147 MCGLLRMEWIWVLLSLLLSFASTLVFVSGERGFIMKTEQVSWFNVTREPEHDFLTRAFNFLWQSDESGYQHVWPDMWAAEYTVPNLMRSREGTFREEAVSRLDIEFGWKIILGTFIGFCGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSSTAISKCMIMGAAGSTAYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVVCNVVFPDWVVTILLIVLFFGTSTKAFFRGVETWKKETIMKKEAARLLETNGYGAEAEYKTIPSGPNGSAENDTEEKPVTILENVYWKEFGLLVFVWVSFLILQIAKQSFTTTCSTAYWVLNLLQIPIAIGVTAYEATALFSGRRVIASTGDHGKSFTVSQLAIYCFFGLIAGIVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVIEYYLLKRFPVPYALYLTVVATIAALVGQHFVRRLIIIFGRASLIIFILASTIFISAISLGGVGISNIVYKIQNHEYMGFDNICKYGS 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0402 507 PANTHER CEREBLON 12 76 - -
Lal21g0402 507 PANTHER CEREBLON 99 505 - -
Lal21g0402 507 PANTHER SULFITE EXPORTER TAUE/SAFE FAMILY PROTEIN 3 12 76 - -
Lal21g0402 507 PANTHER SULFITE EXPORTER TAUE/SAFE FAMILY PROTEIN 3 99 505 - -
Lal21g0402 507 Pfam Sulfite exporter TauE/SafE 369 472 IPR002781 GO:0016021
Lal21g0402 507 Pfam Sulfite exporter TauE/SafE 109 224 IPR002781 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0402 Lal-Chr21 2785490 2790430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0402 - - gmx:100810784 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0402 21 2785490 2790430 Lal21g0402 21 2785490 2790430 ECH
Lal17g0299 17 1871366 1875944 Lal21g0402 21 2785490 2790430 LSH
Lal8g1514 8 19444696 19449716 Lal21g0402 21 2785490 2790430 PCT
Lal21g0402 21 2785490 2790430 Lal8g1514 8 19444696 19449716 PCT