Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0299 ATGAGAAATTTGATGGCTGAGTGGTTGAGAATGGGATGGATATGGATGGTGTTGTTGAGTTTTGCATCAGCTTTGGTGTTTGTTTCAGGTGAAAGAGGTACCATGAAGAAAACAGAAGAAGTATCATGGTTTAATGTTACTAGAGAACCTGAACATGCTTTACTCAATAGAGCTGTGAATTTCTTATGGCAATCTGAGGAATCTGGTTATAAACATGTGTGGCCAGATATTGAATTTGGGTGGCAAATTGTTTTGGGTACTTTTGTTGGTTTTTGTGGAGCAGCTTTTGGAAGTGTAGGTGGTGTTGGTGGTGGTGGCATTTTCGTTCCTATGCTTAGCCTCATCATTGGATTTGATCCAAAATCATCCACAGCTATCTCAAAATGTATGATTATGGGTGCAGCTGTGTCAACTGTTTACTATAACCTTAAGCTAAGGCATCCTACACTGGATATGCCCATTATTGATTATGATTTAGCACTTCTCATTCAACCAATGTTGATGCTTGGCATCAGCATTGGAGTGGCCTTCAATGTTGTATTTCCTGATTGGATGGTCACTATACTGCTTATTCTTCTCTTTTTAGGCACATCAACAAAAGCATTCTTTAAGGGTGTACAAACATGGAAAAAGGAAACCATAATGAAAAGGGAGGCTTCTAGACAACTAGAGGCAAATGGTTCTGGAAATGAAGCAGAATACAAAACTCTTCCTAGTGGACCAAATGGTGGCACCGAAAATGACACCGAAGAAAAACAGGTGACTATTTTTGAAAATGTATACTGGAAGGAGTTTGGGCTTCTTGCATTTGTTTGGATTTCATTCCTTGTACTACAGATTACCAAGCAAAACTATACAACTACTTGTTCAACAGCATATTGGGTACTGAACTTTTTGCAGATTCCTATCGCGATTGGAGTAACTGGATACGAGGCTACTTCCTTGTTCACTGGGCGAAGAGTAATTGCTTCCACTGGAAATCAAGAGAAAGATTTCACTGTTTTCCAGCTTGGTATCTACTGTGTTTTTGGCCTAATAGCTGGAATAGTTGGTGGGTTGCTAGGACTAGGAGGAGGATTTGTTATGGGTCCACTCTTTCTTGAACTAGGAGTTCCACCTCAGGTATCAAGTGCCACTGCCACTTTTGCAATGACCTTCTCCTCATCCATGTCTGTCATAGAATACTACCTTCTGAAGCGTTTTCCGGTTCCTTATGCACTTTATTTCACTGTGGTGGCTACTATAGCAGCTTTAGTTGGACAGCATATTCTGAGAAGGGTTATCAACCTATTTGGGAGAGCATCCCTTATCATATTTATTCTAGCCTTTACAATATTTATCAGTGCAATCTCTTTAGGTGAGACTCCTCCAATTTCTCTTATTTGTGAACAACCATGGGGGGTTGGCATATCAAATATGGTACACAAGATTCAGAATCAGGAATACATGGGATTTGAAAATATCTGCAAGTACGACTCATAA 1482 0.3988 MRNLMAEWLRMGWIWMVLLSFASALVFVSGERGTMKKTEEVSWFNVTREPEHALLNRAVNFLWQSEESGYKHVWPDIEFGWQIVLGTFVGFCGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSSTAISKCMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVVFPDWMVTILLILLFLGTSTKAFFKGVQTWKKETIMKREASRQLEANGSGNEAEYKTLPSGPNGGTENDTEEKQVTIFENVYWKEFGLLAFVWISFLVLQITKQNYTTTCSTAYWVLNFLQIPIAIGVTGYEATSLFTGRRVIASTGNQEKDFTVFQLGIYCVFGLIAGIVGGLLGLGGGFVMGPLFLELGVPPQVSSATATFAMTFSSSMSVIEYYLLKRFPVPYALYFTVVATIAALVGQHILRRVINLFGRASLIIFILAFTIFISAISLGETPPISLICEQPWGVGISNMVHKIQNQEYMGFENICKYDS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0299 493 MobiDBLite consensus disorder prediction 223 249 - -
Lal17g0299 493 PANTHER CEREBLON 9 491 - -
Lal17g0299 493 PANTHER SULFITE EXPORTER TAUE/SAFE FAMILY PROTEIN 3 9 491 - -
Lal17g0299 493 MobiDBLite consensus disorder prediction 221 249 - -
Lal17g0299 493 Pfam Sulfite exporter TauE/SafE 342 448 IPR002781 GO:0016021
Lal17g0299 493 Pfam Sulfite exporter TauE/SafE 88 206 IPR002781 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0299 Lal-Chr17 1871366 1875944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0299 - - gmx:100810784 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0299 17 1871366 1875944 Lal17g0299 17 1871366 1875944 ECH
Lal17g0299 17 1871366 1875944 Lal21g0402 21 2785490 2790430 LSH
Lal8g1514 8 19444696 19449716 Lal17g0299 17 1871366 1875944 PCT
Lal17g0299 17 1871366 1875944 Lal8g1514 8 19444696 19449716 PCT