Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0398 ATGGATTTTTGCTTAAGAGAGTTAGAAGGGAAACAAGCTAATGACCCTTTATTCATTGTGAAAAAAATGAATAACAAATCATCATTATCATCACCAAAATCATCATGTGTTTTTGTTCCAGGTCCTGTGATTGTAGGAGCAGGTCCATCAGGGTTAGCAGCAGCAGCATGTCTCAAAGAAAAAGGTGTTCCAAGTTTGATACTAGAGAGATCTAACTGCATAGCTTCTCTATGGCAACACAAAACCTATGATCGCTTACACCTTCATTTACCTAAGCAATTTTGTGAGTTACCCTTAATGGGGTTTCCTTCTGATTTCCCAACATACCCAACAAAGCAACAGTTCATTGGGTACTTGGAGACTTATGCTGAGAAATTTGGTATTAAGCCAAGGTTCAATGAGACTGTGAAGCATGCTGAGTTTGACTCCAAGGTTGGGTTTTGGCACTTGAAGTGTGTTGATAAGGCTGAGATTGTGACCGAGTTTGTGTGCAAGTGGTTGATTGTGGCCACAGGAGAGAATGCAGAAGCTGTGGTGCCTAATATTGAAGGGGTTGAGGAATTTGGAGGTTCTATAAAGCACACAAGTTTGTATAAAAGTGGTGAAGAGTTTAGAGGGAAGAAAGTTTTGGTGGTTGGTTGTGGAAATTCAGGGATGGAAGTGTGCTTAGATCTTTGCAACCATGATGCTAATCCTTCTCTTGTGGTTAGAGATTCAGTACACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTTGGGTTGTCCATGTGGTTACTCAAGTGGTTACCCATAAGACTTGTCGATAAGTTCTTACTTATTATTTCATGGCTCATGCTTGGTAACACTTCTAGGTTGGGGTTGGACCGGCCAAGTTTGGGTCCGCTTGAACTCAAAAACCTGTCCGGAAAAACCCCAGTCTTAGACGTGGGTACCCTTGCTAAGATTAAAGGTGGAGACATTAAGGTACGTCCAAGCATAAAGCGGCTAAAACTTCATACAGTAGAATTTGTAGATGGAAAACAAGAGAATTTTGATGCCATCATTTTGGCAACTGGTTACAAAAGCAATGTACCCTATTGGCTGAAGGAAGAGAGTATGTTCTCTAAGGAAGATGGGTTCCCAAAGAAGCCATTCCCAAATGGATGGAAAGGTGAAAATGGAGTTTATGCTGTGGGCTTTACAAAAAAGGGATTACTTGGTGCATCCATGGATGCAAAGAAAATAGCTCAAGATATTGAAAGGTGTTGGAAAGATGAGGAAAAACATAGTGGTATTTTTGCTCGTTCACTTTTGCTGCAATCAAATTCATAA 1314 0.4079 MDFCLRELEGKQANDPLFIVKKMNNKSSLSSPKSSCVFVPGPVIVGAGPSGLAAAACLKEKGVPSLILERSNCIASLWQHKTYDRLHLHLPKQFCELPLMGFPSDFPTYPTKQQFIGYLETYAEKFGIKPRFNETVKHAEFDSKVGFWHLKCVDKAEIVTEFVCKWLIVATGENAEAVVPNIEGVEEFGGSIKHTSLYKSGEEFRGKKVLVVGCGNSGMEVCLDLCNHDANPSLVVRDSVHVLPREMLGKSTFGLSMWLLKWLPIRLVDKFLLIISWLMLGNTSRLGLDRPSLGPLELKNLSGKTPVLDVGTLAKIKGGDIKVRPSIKRLKLHTVEFVDGKQENFDAIILATGYKSNVPYWLKEESMFSKEDGFPKKPFPNGWKGENGVYAVGFTKKGLLGASMDAKKIAQDIERCWKDEEKHSGIFARSLLLQSNS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0398 437 PRINTS FAD-dependent pyridine nucleotide reductase signature 42 61 - -
Lal21g0398 437 PRINTS FAD-dependent pyridine nucleotide reductase signature 164 182 - -
Lal21g0398 437 PRINTS FAD-dependent pyridine nucleotide reductase signature 208 226 - -
Lal21g0398 437 PRINTS Pyridine nucleotide disulphide reductase class-II signature 41 63 - -
Lal21g0398 437 PRINTS Pyridine nucleotide disulphide reductase class-II signature 204 228 - -
Lal21g0398 437 SUPERFAMILY FAD/NAD(P)-binding domain 43 242 IPR036188 -
Lal21g0398 437 Pfam Flavin-binding monooxygenase-like 44 369 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lal21g0398 437 SUPERFAMILY FAD/NAD(P)-binding domain 205 417 IPR036188 -
Lal21g0398 437 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 29 423 - -
Lal21g0398 437 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 29 423 - -
Lal21g0398 437 Gene3D - 42 423 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0398 Lal-Chr21 2742522 2747265 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0398 K11816 - gmx:100804746 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0398 21 2742522 2747265 Lal21g0398 21 2742522 2747265 ECH
Lal17g0295 17 1841638 1846033 Lal21g0398 21 2742522 2747265 LSH