Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0295 ATGGATTATTGCTTGAGAGAGTTAGAAGGGAAGAAATCTAATGACCCTTTATTCATTGAAAAAATGAATAACAAATCATTGTCACCGAGATCAACATGTGTTTTTGTTCCAGGGCCTGTGATTGTAGGAGCAGGACCATCAGGGTTAGCAGCAGCAGCATGTCTCAAAGAACAAGGTGTACCAAGTTTGATAGTTGAAAGATCTAACTGCATAGCTTCTCTATGGCAATACAAGACTTATGATCGCTTACACCTTCATTTGCCTAAGCAATTTTGTGAACTTCCACTGATGGGGTTCCCTTCTAATTTCCCAACATACCCAACAAAGCAACAGTTCATTGGGTACTTGGAAACTTATGCTGAGAAATTTGGTATTAAGCCAAGGTTCAATGAGGCAGTGATGCATGCTGAATTTGATTCAAAGGTTGGGTTTTGGCGCTTGAAGTGTGTTGACAAGGCTGATATTGTAACTGAGTTTGTGTGTAAGTGGTTGATTGTGGCCACAGGAGAGAATGCAGAAGCTGTGGTGCCTAATATTGAAGGGGTAGAGGAATTTGGAGGTTCTATAAAGCATACAAGTTTGTATAAAAGTGGTGAAGAGTTTAAAGGGAAGAAAGTTTTGGTGGTTGGGTGTGGGAATTCAGGAATGGAAGTGTGCTTAGATCTTTGCAACAATGATGCTACTCCTTCTCTTGTGGTTAGAGATACTGTACACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTTGGGTTGTCCATGTGGTTATTGAAGTGGTTGCCCATGCAAGTTGTCGATAGGTTCTTACTTATTATCTCATGGCTCATGCTTGGTGACACTTCCAGGTTGGGTTTGTATAGGCCAAGTTTGGGTCCCCTTCAACTCAAAAATCTCTCCGGAAAGACCCCTGTCCTAGACGTGGGTACCCTTGCTAAGATTAAAGGTGGAGATATTAAGGTACGTCCAAGCATAAAGCGGCTAAAGTTTCATACAGTTGAATTTGTAGATGGAACAAAAGAAAATTTTGATGCCATCATTTTAGCAACTGGTTACAAAAGCAATGTACCAATTTGGCTACAGGAAGAGAGTATGTTCTCAAAGGAAGATGGGTTCCCTAGGAAGCCATTTCCAAATGGGTGGAAAGGTGAAAATGGTCTTTATGCTGTGGGTTTTACCAAAAAGGGACTACTTGGTACATCCATTGATGCCAAGAGAATAACTCAAGATATTGAAAGGTGTTGGAAAGATGAGGCAAAGCATACTAGTGCTTTTGCTCGTTCAATTCTGTTGCAATCAAATCCATAA 1305 0.4092 MDYCLRELEGKKSNDPLFIEKMNNKSLSPRSTCVFVPGPVIVGAGPSGLAAAACLKEQGVPSLIVERSNCIASLWQYKTYDRLHLHLPKQFCELPLMGFPSNFPTYPTKQQFIGYLETYAEKFGIKPRFNEAVMHAEFDSKVGFWRLKCVDKADIVTEFVCKWLIVATGENAEAVVPNIEGVEEFGGSIKHTSLYKSGEEFKGKKVLVVGCGNSGMEVCLDLCNNDATPSLVVRDTVHVLPREMLGKSTFGLSMWLLKWLPMQVVDRFLLIISWLMLGDTSRLGLYRPSLGPLQLKNLSGKTPVLDVGTLAKIKGGDIKVRPSIKRLKFHTVEFVDGTKENFDAIILATGYKSNVPIWLQEESMFSKEDGFPRKPFPNGWKGENGLYAVGFTKKGLLGTSIDAKRITQDIERCWKDEAKHTSAFARSILLQSNP 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0295 434 SUPERFAMILY FAD/NAD(P)-binding domain 40 238 IPR036188 -
Lal17g0295 434 Pfam Flavin-binding monooxygenase-like 41 365 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lal17g0295 434 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 26 423 - -
Lal17g0295 434 PRINTS FAD-dependent pyridine nucleotide reductase signature 39 58 - -
Lal17g0295 434 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 179 - -
Lal17g0295 434 PRINTS FAD-dependent pyridine nucleotide reductase signature 205 223 - -
Lal17g0295 434 PRINTS Pyridine nucleotide disulphide reductase class-II signature 38 60 - -
Lal17g0295 434 PRINTS Pyridine nucleotide disulphide reductase class-II signature 201 225 - -
Lal17g0295 434 Gene3D - 39 420 IPR036188 -
Lal17g0295 434 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 26 423 - -
Lal17g0295 434 SUPERFAMILY FAD/NAD(P)-binding domain 202 393 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0295 Lal-Chr17 1841638 1846033 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0295 K11816 - gmx:100804746 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0295 17 1841638 1846033 Lal17g0295 17 1841638 1846033 ECH
Lal17g0295 17 1841638 1846033 Lal21g0398 21 2742522 2747265 LSH