Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0397 ATGGTAGAAGGAGGTAATGAAGAGGAACTTGAATTCAAATGGGGAACAAAGGGAAAACGAGGTGGTAAAAAAAAGGATGTGCAATTTTATGAATCGTTTCGATATGATGGTGTTGATTACAAACGTTATGATTCTGTGTATCTCTACAAGGAAGGTGAACCTGAACCTTTTATTGGAAAAATCATAAAAATTTGGGAGAATGCTGATAAATCAAAGAAAGTGAAGGTTTTATGGTTTTTCAGATCGTGCGAGATTCTCAATTTTTTGGAAGGGATTGATCCGTGTGAAAATGAGTTGTTTTTAGCATATGGTGATGGGTTAGGGCTTGCAAATATCAATCCTCTGGAAGCTATTTCTGGGAAGTGCAACGTTGTTTGCACTGCTAGGGATAGTAGGAATCCTCAATTATCGGATGAAACCCAAAGTGCTGAATTTGTATTCTGTCGTTTCTTTGATGTTGGGAAGTGTAAAATCTTGGATAAGATAGATGATGATAAGGTTGCTGACATTGAAGTTAAAAATATTTTTAACAATTTAGATAATGAAAAGGTCATTGGTGTCGTGACACTTGATTTAAACAAGAAACAAAGTAGTGGGAAATTCATGGCGAGTAATGAAGTGGTGGATCTTCCGAGTCAAAACAATAGCCAACCTATAATTGGAACGACTAATGGCAAGGGTTTTGTCACATTAGTTAGAGAAAATGTTGAGTCTAAGCCTTTGGTAGGAGAAAATCATGTCTCTTGTGATGGTGTAAAAGAAACAAGTAAATTCAGTGACAAGACTGTACAACAGGTTGAAATAAAAGGGAATAGGGTTTCTAAGTCTTCTTTGGTTAAGAAAAAATCATCTACTAAACTATATGATAGTTCTAAAGATAGTGGAACAAGGGAAATAACTAAGACAAATGATAATCGGAGAAATATCTCCATTGAGAAGACCCCATCAAGGTCCAAGGTTGATTCAGAAAAGGGTGAAGGGGAGATTTTTGGGAATCTTGTTGGGAAAATTAACAAGGAACTGGTCGAAGAAAAGGTGGAGAAGGAAAAATGTTGTGATTCTATTCAAGTATCTAATGAGAAATTAAAGAGTAACTTGCAAAGTCGAAGACTTGTTTCCAACGATGCTGATGTGAAGAAAATAGCTTTGCCTTCCTCTAAGGTTGATTCAGAAAATGGGGAAGGCAATGATGTTGACAGACTTGTTGGGAAAATTAACAAGGGGTCGTTCAAGGAAAATGTGGAGAATGAAAAATATTGTGATTCTATTGAAGTCTCTAATGAGAAGTTAAAGAGTAGCTTACAAAGTGGAACAATTGCTCCCAATAATGGTAATGTCAACAAAATAGCTCAACTTTCGTCTAAGGTTGATTCTAAAAATGGTGAATGCAAGGTTGTTGGCTCTCTTCTTCGGAAAATTAACAAGGGATCAATCGAGGAAAAGGGGGAGAATGAAAAATGTCGTGATTCTAACTTGCTAAGGCAAAGACTTCTTTCCAATCACGATGATGCGAAGAAAATAGCTCAGGCTTCATCAACGGATAAATATAAGCTTCAACGAGTAAAGGATTTTTTTGAGGGAGAGGAAGTTCCTTCGAAGAAGTTAAAGCTTGACCAGAAACCAATGGAACTATCTGATGACAAGTTGCGCAAGAATCCTGCAACTTCTCCAAATTTGGAACAAAAGTTAAATCGTTTTGTAAAAGAAGTTACTAGGCGACCTGACACTGTAAGTTGCATTGCAAGGACCATCGCCTTGTCTTGA 1764 0.3679 MVEGGNEEELEFKWGTKGKRGGKKKDVQFYESFRYDGVDYKRYDSVYLYKEGEPEPFIGKIIKIWENADKSKKVKVLWFFRSCEILNFLEGIDPCENELFLAYGDGLGLANINPLEAISGKCNVVCTARDSRNPQLSDETQSAEFVFCRFFDVGKCKILDKIDDDKVADIEVKNIFNNLDNEKVIGVVTLDLNKKQSSGKFMASNEVVDLPSQNNSQPIIGTTNGKGFVTLVRENVESKPLVGENHVSCDGVKETSKFSDKTVQQVEIKGNRVSKSSLVKKKSSTKLYDSSKDSGTREITKTNDNRRNISIEKTPSRSKVDSEKGEGEIFGNLVGKINKELVEEKVEKEKCCDSIQVSNEKLKSNLQSRRLVSNDADVKKIALPSSKVDSENGEGNDVDRLVGKINKGSFKENVENEKYCDSIEVSNEKLKSSLQSGTIAPNNGNVNKIAQLSSKVDSKNGECKVVGSLLRKINKGSIEEKGENEKCRDSNLLRQRLLSNHDDAKKIAQASSTDKYKLQRVKDFFEGEEVPSKKLKLDQKPMELSDDKLRKNPATSPNLEQKLNRFVKEVTRRPDTVSCIARTIALS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0397 587 ProSiteProfiles BAH domain profile. 38 162 IPR001025 GO:0003682
Lal21g0397 587 PANTHER PROTEIN ANTI-SILENCING 1 1 576 - -
Lal21g0397 587 Pfam BAH domain 39 129 IPR001025 GO:0003682
Lal21g0397 587 PANTHER PROTEIN ANTI-SILENCING 1 1 576 - -
Lal21g0397 587 SMART BAH_4 38 163 IPR001025 GO:0003682
Lal21g0397 587 MobiDBLite consensus disorder prediction 277 324 - -
Lal21g0397 587 MobiDBLite consensus disorder prediction 536 557 - -
Lal21g0397 587 MobiDBLite consensus disorder prediction 536 550 - -
Lal21g0397 587 Gene3D - 7 161 IPR043151 -
Lal21g0397 587 MobiDBLite consensus disorder prediction 285 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0397 Lal-Chr21 2714915 2727483 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0397 - - lang:109344190 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0397 21 2714915 2727483 Lal21g0397 21 2714915 2727483 ECH
Lal17g0293 17 1814015 1825277 Lal21g0397 21 2714915 2727483 LSH