Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0293 ATGGTAGAAGGAGATGGTGAAGAGGAACTCGAATTCAAGTGGGGAATAAAGGGAAAGCTAGGTGGTAAAAAGAAGGATGTGCAATTTTATGAATCGTTTCGATATGATGGTGTTGATTACAAACGTTATGATTCTGTGTATCTTTACAAGGAAGGTGAACCTGAACCTTTTATTGGAAAAATCATAAAAATATGGGAGAATGCTGATAAGTCAAAGAAAGTGAAGGTTTTATGGTTTTTCCGACCTTGCGAGATTCTGAATTTTTTGGAAGGGATTGATACACTTGAGAATGAGTTGTTCTTAGCATATGGTGATGGCTTAGGGCTTGCAAATGTCAATCCTCTGGAAGCTCTTTCTGGGAAGTGCAATGTTGTTTGTATTGCTAAGGATAGTAGGAATCCTCAGGTATCAGATGAAGAACTTCAAGATGCTGAATTTGTATTCTCTCGATTCTTTGATGTTGGTAAGCGTAATATATTGGATAAGATAGACGATGATAAGGTTGCTGACACTGAAGTTAAAAATATTTTTAACAATTTAGATAGTCAAAAGGCCGTTGGTGTTGTGAAACTTGATTTAGACAAGAAAGAAGGTAGTGGGAAAGTCACGACGAGTAATGAAGTTGTGGATCTTCCGAGTCAAAAAAATAGCCAGCCTGTAATGGGAAAGGCGAATGGCAAGGGTTTTGCCGCATTAGTTAGAGAAAATGTCGAGTCTAAGCCTTCGTCTGGAGAAAAACCAATCTCTCGCAATGGTGTAACTGAAGCAAGTAAATCTAGTGACAAGACCATGCCTCAAGCTAAAGTAAAAGGGAATGGGACTTCTAATGCTTCTTTGGTTAAGCAAAAATCATCTACTAAACTATCAGATGGTTCTAATGATTGTGGAATGACGAGAATAACTAAGACGAATGATAAACAGGGAAATATCTCTGGTGAGAAGACCCCATCAAGGTCTAATGTTGATTTAGGAAACGGTGAATGCAAGGTTGTCAGGGGTCCTGTCGGGAAAATCAACAAGGGATCGGCCGAGGTCAAGATGGAGAAGGAAAAATCTGGTGATTCTATTAAAGTCTCTAATGAGAAGTTAAAACGTGACTTGCAAAGTCAGAGACTTGCTTCTGATGATGGTGATATGAACAAAATATCTCCGTCTCCATCTAAGTTTGCTTCAGAAAAGGGTGGATGCAAGGTTGACAATCTTGTTCGGAAAATTAACAAGGGATCAATCGATGAAAAGGGGGAGAAGAAAAAATGTGGTGATTCTAACTTGCAAAGTCGAAGACTTGTTTCCAACGATGATGCGAAGAAAATAGCCACGTCTACATCAAAAGATAAATACAAGCTTCAACGGGCAGAGAATTTTTGCGATGGGGAGAATGTTCCTTCAAAGAAGTTAAAGCTTGACCACAAGCCAATGAAACTATCTGATGAGAAGTTGCGCAAAAAACCTACAAATTCTTTGAATTTGGAACAAAAGTTAAATCGATGTGCAAAAGAAGTTACTAGACGACCTGACACTCCTTGGGAAGAAAGAATGAAGACTGCTTATGAGCAAGGAACACTTGTGCTACTTGAAAACTTCGATCCCTCTCTAACTTCAGTAGAGGTAGAGAATATTATTTGGAATGGCTTTAATGAAAGTTGCACTGCAAAGGTGATCCAGAGAACTGCATTTTCTAGCCCTCATTCTGGTCAAGCTTTTGTTATTTTCAAAAAAAAGGATGCAGCGGAGTTGGTTGCTAAAAAATTAGACAACGGGTGTTTCTTAATGTCAAATGGACGTGGTGTTATAAATGATGGTATGAGTAGTTATCCGAACGAGACGAGGAGAAGTGGCTTAGTGAGTGCTGAAGAGTGGTCTGATGTTCTTCAGAAACACATTAGTGACTGGATTTCTCGGGAAAATGAGCCCACTCTTGTGGCGATACTGTTGAGTGAAAGTAGTCCGCTTTTTGGAAGCATTGGACGTCCCTGCTTTCCAGAAAAGAAGCCAATATTTTATGGTCATCATGTTCTCGATCAACATAGAACGCAGATGCAACGTGAGATGAAAGATGCTGTCTCTACTTCACATTGTTCTCAGCCAAATAATATCGAGTACGAGATGGCCTTGGAATGGTGTTTGCTACAAGAAAGATCAGACAAAGCATGGAGTAGATTGTTCAAGGCTTGGAGATCCTTACTAGTTTTGGTACTTTATATCTTCCCTGTTTGTCCATGCAGGGTGATTACAAGTATGCAGTCCCGGAAATCAAAGGTTCTCGGCTTCTGGAACTCAGCATGGTCTTTCTATACCATCTGTCTATATTGTAATAGTTGGTCAGCTTCTTTTTCAATATCAAATGCTGTTACATTTTTATTTATAACTTTTGTAGAAAGTGTGGTGATCATGGTCATTGATGCAGTGGGGCTTGAACCTGCCAAATTTTGTGTTCATCAGTTGTGA 2448 0.3934 MVEGDGEEELEFKWGIKGKLGGKKKDVQFYESFRYDGVDYKRYDSVYLYKEGEPEPFIGKIIKIWENADKSKKVKVLWFFRPCEILNFLEGIDTLENELFLAYGDGLGLANVNPLEALSGKCNVVCIAKDSRNPQVSDEELQDAEFVFSRFFDVGKRNILDKIDDDKVADTEVKNIFNNLDSQKAVGVVKLDLDKKEGSGKVTTSNEVVDLPSQKNSQPVMGKANGKGFAALVRENVESKPSSGEKPISRNGVTEASKSSDKTMPQAKVKGNGTSNASLVKQKSSTKLSDGSNDCGMTRITKTNDKQGNISGEKTPSRSNVDLGNGECKVVRGPVGKINKGSAEVKMEKEKSGDSIKVSNEKLKRDLQSQRLASDDGDMNKISPSPSKFASEKGGCKVDNLVRKINKGSIDEKGEKKKCGDSNLQSRRLVSNDDAKKIATSTSKDKYKLQRAENFCDGENVPSKKLKLDHKPMKLSDEKLRKKPTNSLNLEQKLNRCAKEVTRRPDTPWEERMKTAYEQGTLVLLENFDPSLTSVEVENIIWNGFNESCTAKVIQRTAFSSPHSGQAFVIFKKKDAAELVAKKLDNGCFLMSNGRGVINDGMSSYPNETRRSGLVSAEEWSDVLQKHISDWISRENEPTLVAILLSESSPLFGSIGRPCFPEKKPIFYGHHVLDQHRTQMQREMKDAVSTSHCSQPNNIEYEMALEWCLLQERSDKAWSRLFKAWRSLLVLVLYIFPVCPCRVITSMQSRKSKVLGFWNSAWSFYTICLYCNSWSASFSISNAVTFLFITFVESVVIMVIDAVGLEPAKFCVHQL 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0293 815 Pfam BAH domain 39 154 IPR001025 GO:0003682
Lal17g0293 815 MobiDBLite consensus disorder prediction 237 327 - -
Lal17g0293 815 SMART BAH_4 38 164 IPR001025 GO:0003682
Lal17g0293 815 MobiDBLite consensus disorder prediction 202 221 - -
Lal17g0293 815 MobiDBLite consensus disorder prediction 373 387 - -
Lal17g0293 815 MobiDBLite consensus disorder prediction 366 394 - -
Lal17g0293 815 MobiDBLite consensus disorder prediction 198 224 - -
Lal17g0293 815 MobiDBLite consensus disorder prediction 242 322 - -
Lal17g0293 815 PANTHER PROTEIN ANTI-SILENCING 1 1 599 - -
Lal17g0293 815 PANTHER PROTEIN ANTI-SILENCING 1 643 724 - -
Lal17g0293 815 PANTHER PROTEIN ANTI-SILENCING 1 1 599 - -
Lal17g0293 815 PANTHER PROTEIN ANTI-SILENCING 1 643 724 - -
Lal17g0293 815 Gene3D - 5 163 IPR043151 -
Lal17g0293 815 ProSiteProfiles BAH domain profile. 38 163 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0293 Lal-Chr17 1814015 1825277 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0293 - - lang:109328093 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0293 17 1814015 1825277 Lal17g0293 17 1814015 1825277 ECH
Lal17g0293 17 1814015 1825277 Lal21g0397 21 2714915 2727483 LSH