Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0394 ATGGCGTCTCCGAAACTCTTCATTCTCATCGCGCTTTTCGTTGCCCTAATTTTCTCAATCGTTAATGCCGAAAGCGGTGTTGATATCCTCATCGAAGAACAAGGAGGCGCTTCACAACATCATAATCATGATTCCTCTACTCTTAAGATCCAACTCGATCAACTCAACTCTAAGATCCACACCCTAGAAACTCACATTAGTGTGAAGTCACAAGAAGTGAAGAAGAAGGATGAAGTTATAGCAGAAAAAGAAAATATCATACGAGATAGATCCAGTAATATTGAGTCTTTGCAGAGTGAGATTGCTTCTCTTCGGAAAAAAGGGTCATTGGTTATTGAGGAGGAGTTTGGAAAGACTCATGCACGTGCCGGTGAACTACAAAATCAGGTGGAAAAGCTTGAAAGGGAACTCGAAAAACAAAAGAAGGAGAAAGTGATCTGGGAAACCAGGGTAGCTGAGGCAGAGAAAAAAGTCCATGGGTTGAAGTCAAAATTAGAGGATTTGCAAAAGATAAATGAGGAACAGAAGGCAAAGATTCGCAAACTTGAACGTGCTCTTAAAACTGCCGAGGAAGAAATGGTGAAGGCAAAGTTTGAGGCAACTTCCAAAGTAAAAGAGCTAACGAAGGTTCATGGTGCTTGGCTTCCACCTTGGCTTGCTGTACACTGTATTCATAGTAAGTCTTTTGTTGAGAGGCATTGGACTAAACATGGGAAGCCTGCTTTGGAAGTGGCGACTCAAAAGGTTCTAGAAAAGAAGGCCCAAGCAGGAAAGTGGGCTGAACCTCATGTGGAAACAATTACAACTAAATGGATACCGGCTGTAAAAGAACAATGGTATGTGGTGAAAACAAATGCTGAATCTCACGTGCAATTATTGACTACAAAAACTGTTGAAGCTTATGAGGCATCAAAGAGTGCAATTGCTCCTCACTTAAGTAGCGCAAAAGAAGTCATTGATCCTTATTATCGGGAAGCTAAGAGGTTTAGCAAGCCATACATTGATCAGGTTGCTACTGCAGCTAAACCCCATGTTGATAATGTACAAGTGGTTTTGAAGCCCTACACGAAGAAAGTTGTTCATGCTTATGGGACGTTCTTGGAATCAGCCACTACATATCATCGCCAGGTCCAAGCTACTGTCGAGGAGACACTGAACAAGCATGAACTCACTAGACCTCTTGCTACTAAAGAATTGGAATGGTTTGCGGCCTCAGCCCTTTTGGCCTTGCCCATTATTTTACTGGCTAGAGTTTTTTCTGCCATTTTCTGCACAAAGGCAAAGAAACCAGTTAAAAGCAGAAACACCCATTCACGGCGTAAAGCTAAACGAGTGCATCCTGAGAAATAG 1350 0.4222 MASPKLFILIALFVALIFSIVNAESGVDILIEEQGGASQHHNHDSSTLKIQLDQLNSKIHTLETHISVKSQEVKKKDEVIAEKENIIRDRSSNIESLQSEIASLRKKGSLVIEEEFGKTHARAGELQNQVEKLERELEKQKKEKVIWETRVAEAEKKVHGLKSKLEDLQKINEEQKAKIRKLERALKTAEEEMVKAKFEATSKVKELTKVHGAWLPPWLAVHCIHSKSFVERHWTKHGKPALEVATQKVLEKKAQAGKWAEPHVETITTKWIPAVKEQWYVVKTNAESHVQLLTTKTVEAYEASKSAIAPHLSSAKEVIDPYYREAKRFSKPYIDQVATAAKPHVDNVQVVLKPYTKKVVHAYGTFLESATTYHRQVQATVEETLNKHELTRPLATKELEWFAASALLALPIILLARVFSAIFCTKAKKPVKSRNTHSRRKAKRVHPEK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0394 449 SUPERFAMILY Apolipoprotein A-I 205 383 - -
Lal21g0394 449 PANTHER OS08G0519400 PROTEIN 1 449 - -
Lal21g0394 449 Coils Coil 116 199 - -
Lal21g0394 449 Coils Coil 80 107 - -
Lal21g0394 449 PANTHER OS08G0519400 PROTEIN 1 449 - -
Lal21g0394 449 Gene3D - 39 211 - -
Lal21g0394 449 SUPERFAMILY Tropomyosin 43 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0394 Lal-Chr21 2682197 2688578 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0394 - - gmx:100781922 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0394 21 2682197 2688578 Lal21g0394 21 2682197 2688578 ECH
Lal17g0289 17 1796578 1802045 Lal21g0394 21 2682197 2688578 LSH