Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0289 ATGGCGCCTCCGAATCTCTTCCTTCTCCTCGCGCTTTTCGTTGCCCTAATTTTCTCAAACGTTAGGGCTGAAGCCGTTGTTGAAGATCTTCCCATTGAAGAACACGGAGGCGTTTCACAACATCGTCAATATGATTCTTCCGCTCTTAAGATCCAACTCGATCAACTCAATTCTAAGATCCATACCCTAGAAACTCACATCAGTGAAAAGTCAGAAGAAGTGAAGAAGAAGGATGAAGTTATAGCAGAAAAGGAAAACATAATTCGAGATAGTTCCGGTACTATTGAGTACTTGAAGAATGAGATTGCTTCTCTCCAGAAAAAAGGGTCCTCGGTTGCACAGGAGGAAGCTGGAAAGGCTCATGCACGTGCTGGCGAACTACAAAAGCAGGTGGAAAAGCTTGAAAGGGAACTAGAAACACAAAAGAAGGAAAAAGTGATCTGGGAAACCAGGGTAGCTGAGGCAGAGAAAAAATTTATTGTCTTGAACTCAAAATTAGAGGATTTGCAAAAGATAAATGAGGAACAGAAGGCCAAAACTCGCAAAATTGAACGTGCTCTTAAAGTTGCTGAGGAAGAAATGGTGAAGGCAAAGTTTGAGGCAACTTCCAAAGCAAGCAAGTTAACAGAGGTTCATGGTGCTTGGCTTCCACCTTGGCTTGCCGTACACTATATTCATAGTAAGTCTTTGGTTGAGAGCCATTGGAATAAGCATGGGAAGCCTGCTTTGGAAGTGGCGACTCAGAAGCTTATAGAGATGAAGGTCCAAGCTGGAAAGTGGGCTGAACCTCATGTGGAAACAATTTCAACTAACTGGGTACCGGCTGTAAAACAACAATGGTCTGTGGTGAAAACAAATGCTGAACCTCATGTGCAATTATTGACTACAAAAACTGTTGAAGCTTATGAGGCATCAAAGAATGTAATTGCTCCTCACTTAAGCAGGGCAAAAGAAGTTGTTGATCCTTATTATCGGGAAGCTAAGAAGTTTAGCAAGCCATACATTGATCAGATTGCTGTTGCAGCTAAACCTCATGTTGATAAAGCACAAGTGGTTTTAAAGCCCTACACAAAGAAAGTCATTTATGCTTATGGGAAGTTCTTGGAATCAGCCACTACATATCATCGCCAGGTCCAAGCCACTGTCCAGGAGACACTGAAAAAGCATGAACTCACTAGACCTCTTGCTACGAAAGAATTGGAATGGTTTGCGGCCTCTGCCCTTTTGGCCCTGCCCATTATTTTACTGGCTAGAGTTTTTTCTGCCATTTTCTGCACAAAGGCGAAGAAACCAGCTAGGAGCAGAAATGCTCACAATTCACGACGTAAAGCTAAACGAGGGCATCCTGACAAGTAG 1356 0.4292 MAPPNLFLLLALFVALIFSNVRAEAVVEDLPIEEHGGVSQHRQYDSSALKIQLDQLNSKIHTLETHISEKSEEVKKKDEVIAEKENIIRDSSGTIEYLKNEIASLQKKGSSVAQEEAGKAHARAGELQKQVEKLERELETQKKEKVIWETRVAEAEKKFIVLNSKLEDLQKINEEQKAKTRKIERALKVAEEEMVKAKFEATSKASKLTEVHGAWLPPWLAVHYIHSKSLVESHWNKHGKPALEVATQKLIEMKVQAGKWAEPHVETISTNWVPAVKQQWSVVKTNAEPHVQLLTTKTVEAYEASKNVIAPHLSRAKEVVDPYYREAKKFSKPYIDQIAVAAKPHVDKAQVVLKPYTKKVIYAYGKFLESATTYHRQVQATVQETLKKHELTRPLATKELEWFAASALLALPIILLARVFSAIFCTKAKKPARSRNAHNSRRKAKRGHPDK 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0289 451 Coils Coil 53 73 - -
Lal17g0289 451 Gene3D - 40 212 - -
Lal17g0289 451 MobiDBLite consensus disorder prediction 431 451 - -
Lal17g0289 451 PANTHER OS08G0519400 PROTEIN 1 451 - -
Lal17g0289 451 SUPERFAMILY Apolipoprotein A-I 201 386 - -
Lal17g0289 451 Coils Coil 117 200 - -
Lal17g0289 451 PANTHER OS08G0519400 PROTEIN 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0289 Lal-Chr17 1796578 1802045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0289 - - gmx:100781922 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0289 17 1796578 1802045 Lal17g0289 17 1796578 1802045 ECH
Lal17g0289 17 1796578 1802045 Lal21g0394 21 2682197 2688578 LSH