Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0389 ATGGTTTTCTGGGTTTTTGGCTATGGTTCACTGGTGTGGAACCCAGGGTTTGATTATGATGAAAAAATTATTGGCTTCATTAAGGATTATAGACGTGTATTTGATTTAGCTTGCATTGATCATAGAGGAACACCTGAACACCCTGCAAGGACTTGCACGTTGGAGGAGAAAAAAGGAGCAATTTGCTTAATCTATATACAACAACAATCAAGTTTTAATCGCACCGGATTGGCTATAAGAAATTCGATATTTCAGTGGGGTGCTGCGTATTGTGTTCAAGGAAGCCCTGAAAAGGAAAGATTGGCCATGCAGTATTTGGAGAAACGGGAATGTGAATATGATCAAAAGACTCTTGTAAGCTTCTACAAGGAAGAAGATTCACTGAATCCTGTTTTAACTGGGGTCATTGTATTCACATCTACTGCGGACAAAGCAAACAAATACTATCTGGGACCTGCCCCACTGCAAGACATGGCGAGGCAAATAGCAACTGCTTATGGCCCATGTGGAAACAATAGAGATTATCTTTTCCTGCTTGAAAAGGCCATGTATGATATTGGACATGAGGACGATTATGTGATAGAGCTTGCCAATGAAGTTAGAAAAGAACTTGGAATAGTTAATGAGCTTGCCAATGGAGTGAGAAAAGAACTTGGAATAGTTAATGTACTCCCAAAAGACAAGAAGTTGGTTGCACCCACTCCTCATGTGCCTATCCCAGGTCTTAAACTGCAAGCACTGCCTATTGCTTTGGATAGTTGA 762 0.4068 MVFWVFGYGSLVWNPGFDYDEKIIGFIKDYRRVFDLACIDHRGTPEHPARTCTLEEKKGAICLIYIQQQSSFNRTGLAIRNSIFQWGAAYCVQGSPEKERLAMQYLEKRECEYDQKTLVSFYKEEDSLNPVLTGVIVFTSTADKANKYYLGPAPLQDMARQIATAYGPCGNNRDYLFLLEKAMYDIGHEDDYVIELANEVRKELGIVNELANGVRKELGIVNVLPKDKKLVAPTPHVPIPGLKLQALPIALDS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0389 253 Pfam ChaC-like protein 4 202 IPR006840 GO:0003839|GO:0006751
Lal21g0389 253 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 63 IPR006840 GO:0003839|GO:0006751
Lal21g0389 253 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 79 226 IPR006840 GO:0003839|GO:0006751
Lal21g0389 253 PANTHER GAMMA-GLUTAMYLCYCLOTRANSFERASE 2-2 79 226 - -
Lal21g0389 253 PANTHER GAMMA-GLUTAMYLCYCLOTRANSFERASE 2-2 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0389 Lal-Chr21 2648360 2651304 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0389 K22596 - gmx:100793027 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0389 21 2648360 2651304 Lal21g0389 21 2648360 2651304 ECH
Lal17g0281 17 1746893 1749375 Lal21g0389 21 2648360 2651304 LSH
Lal21g0389 21 2648360 2651304 Lal4g0262 4 1702249 1705943 LSH