Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0281 ATGGTGTTCTGGGTTTTTGGCTATGGTTCATTGGTGTGGAACCCAGGGTTTGAGTATGATGAGAAAATTGTTGGCTTCATCAAGGACTATAGACGTGTATTTGATTTAGCTTGCATTGATCATCGAGGAACACCTGAACACCCTGCAAGGACTTGCACATTAGAGGAGAAAGAAGGCGCAATTTGCTGGGGTGCTGCTTATTGTGTTCGAGGAGGTCCTGAAAAGGAAAAATTGGCTATGCAGTATTTAGAGAGACGGGAATGTGAATATGATCAAAAGACTCTTGTAAGCTTCTACAAGGAAGAAGATTCTCTGAACCCTGTTTTAACTGGAGTTATTGTATTCACATCTACTGCTGACAAAGCAAACAAATACTACTTGGGACCTGCCCCACTGCAAGACATGGCAAGGCAAATAGCAACTGCTTATGGCCCCTGTGGAAACAATAGAGATTATCTTTTCCTGCTTGAAAAGGCCATGCATGATATTGGCCATGAAGAAGAGTATGTGATAGAGCTTGCGAATGAAGTGAGAAAAGAACTTGGAATAGTGAATGTAGTCCAAAAAGAAAAGAAGTTGGTTGCACACCCTACTCATGTACCAATCCCAACTCTTCAACTGCGCCCACTGCTACCTATTGCTTTGGATAGTTAA 654 0.422 MVFWVFGYGSLVWNPGFEYDEKIVGFIKDYRRVFDLACIDHRGTPEHPARTCTLEEKEGAICWGAAYCVRGGPEKEKLAMQYLERRECEYDQKTLVSFYKEEDSLNPVLTGVIVFTSTADKANKYYLGPAPLQDMARQIATAYGPCGNNRDYLFLLEKAMHDIGHEEEYVIELANEVRKELGIVNVVQKEKKLVAHPTHVPIPTLQLRPLLPIALDS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0281 217 Gene3D - 2 192 - -
Lal17g0281 217 Pfam ChaC-like protein 4 179 IPR006840 GO:0003839|GO:0006751
Lal17g0281 217 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 210 IPR006840 GO:0003839|GO:0006751
Lal17g0281 217 CDD GGCT_like 5 95 IPR013024 -
Lal17g0281 217 PANTHER GAMMA-GLUTAMYLCYCLOTRANSFERASE 2-2 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0281 Lal-Chr17 1746893 1749375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0281 K22596 - gmx:100793027 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0281 17 1746893 1749375 Lal17g0281 17 1746893 1749375 ECH
Lal17g0281 17 1746893 1749375 Lal21g0389 21 2648360 2651304 LSH
Lal17g0281 17 1746893 1749375 Lal4g0262 4 1702249 1705943 LSH