Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0290 ATGGGTCGCGACGGCGATAGGTGGTGCTTAGTCACCGGAGGCCGTGGCTTCGCCGCACGTCACTTGGTAGAAATGCTAATCCAGTCCAACTTATACTCCGTTCGCATCGCCGATTTAGGATCCACCATAGATCTCGATCCTTCTGAACAATTAGGCATTCTCGGTGAAGCTTTAACTTCTGGACATGCTCAATATATAACCCTCGATCTTCGCAACAAGGAGCAAGTGTTGAAAGCGTGTGAAGGAGCTGAAGTTGTGTTCCACATGGCTGCTCCTAATTCGTCCATTAATAACTACCAGCTCCATCACTCTGTCAATGTTCAAGGAACGAAGAATGTGATCGATGCTTGTTTTGAGCTTAAAGTGAAGCGACTCATATACACTAGCTCTCCTAGTGTTGTTTTTGACGGTGTTCATGGAATTCATAATGGAAATGAAACATTGCCATATCCATCATCGCATAATGACCATTATTCGGCTACTAAAGCCGAGGGTGAGGTGTTGGTCATTAAGGCCAATGGGAAGGATGGACTCTTAACATGCTGCATACGCCCTAGCAGCATTTTTGGGCCTGGCGATAAACTGCTCGTGCCTTCCTTAGTTGATGCTGCCAGGGCAGGGAAATCCAAGTTCATTATTGGTGATGGCAATAATGTTTATGATTTTACTTATGTTGAAAACGTGGCTCATGCTCATATATGTGCTGAACGAGCTCTGGCTTCAGAGGGGACAGTTTCAGAAAAAGCTGCAGGAGAGACATATTTCATTACGAATACAGAACCTATAAAGTTTTGGGAGTTCATGTCACTGATCCTGGAAGGTCTTGGATATGAAAGGCCTAGAATAAAGATTCCTGCCTTTCTTATCATGCCAATTGCACATTTGGTGGAGTTGATATATAGGCTGCTAGGCCCATATGGAATGAAGGTGCCACAGTTGACGCCCTCAAGAGTAAGACTCCTGTCTTGCAGTAGATCATTCGATTGCTCAAAAGCAAAGGATCGGCTTGGCTATGCACCTATCGTAACACTACAGGAGGGTCTTCAGAGGACGATTGAATCATACCCACACCTGAGGGCCGAAAATCAACCTAAAACCAAAAGAGAAGGACCCTCAAAAGCTTCCATATACCTTGGAAGTGGAAGAGTTGCTGACACATTGCTTTGGAAGGATAGAAAGCAAACTTTCACCACATTGTTGGTATTGGCTGCAATATACTTCAACTTCATTGCATCTGGGAACACCTTCGTTACTGCTATTTCAAAGCTTCTATTATTCATATCGATCTTTTTATTCATTCATGGCATTCTACCTGCAAAGATATTGGGGTATACTATTGAGAAAATGCCCACATCATGGTTTCACTTATCAGAAGATATGTCCCATCAAATTGCTCTGTCAGTGGCCTCATCTTGGAATTTTTCTGTGAATGTTTTAAAATTCCTTGCACAAGGAAATAACTTGGAGCTGTTTTCCAAGGTTATTTTCTCTTTGGTTATCCTTAGCTTTCTTGGAGGCTTTTCACTTCAAAACCTATATATTATAGGTCTTGCCTTTGCATTTGTAGCCTTCTACATTTATGAAAAGAAGGAAGAAGACATCGATGGCATATTCATAAAAATACATTCTTTTGGTTGCAAGTTGAACTCAGATTTCACCAGGAAGTTTCTTCTTTCAAAGAAGATTGATTGA 1692 0.4202 MGRDGDRWCLVTGGRGFAARHLVEMLIQSNLYSVRIADLGSTIDLDPSEQLGILGEALTSGHAQYITLDLRNKEQVLKACEGAEVVFHMAAPNSSINNYQLHHSVNVQGTKNVIDACFELKVKRLIYTSSPSVVFDGVHGIHNGNETLPYPSSHNDHYSATKAEGEVLVIKANGKDGLLTCCIRPSSIFGPGDKLLVPSLVDAARAGKSKFIIGDGNNVYDFTYVENVAHAHICAERALASEGTVSEKAAGETYFITNTEPIKFWEFMSLILEGLGYERPRIKIPAFLIMPIAHLVELIYRLLGPYGMKVPQLTPSRVRLLSCSRSFDCSKAKDRLGYAPIVTLQEGLQRTIESYPHLRAENQPKTKREGPSKASIYLGSGRVADTLLWKDRKQTFTTLLVLAAIYFNFIASGNTFVTAISKLLLFISIFLFIHGILPAKILGYTIEKMPTSWFHLSEDMSHQIALSVASSWNFSVNVLKFLAQGNNLELFSKVIFSLVILSFLGGFSLQNLYIIGLAFAFVAFYIYEKKEEDIDGIFIKIHSFGCKLNSDFTRKFLLSKKID 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0290 563 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 10 284 IPR002225 GO:0003854|GO:0006694|GO:0016616
Lal21g0290 563 Pfam Reticulon 383 538 IPR003388 -
Lal21g0290 563 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 5 369 - -
Lal21g0290 563 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 355 IPR036291 -
Lal21g0290 563 ProSiteProfiles Reticulon domain profile. 383 535 IPR003388 -
Lal21g0290 563 Gene3D - 3 359 - -
Lal21g0290 563 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0290 Lal-Chr21 1922469 1929179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0290 10 372 Lipid Metabolism Gene Families AT2G33630 31.496 3.69e-47 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0290 K23558 - gmx:100799363 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0290 21 1922469 1929179 Lal21g0290 21 1922469 1929179 ECH
Lal17g0179 17 1087055 1092867 Lal21g0290 21 1922469 1929179 LSH