Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0281 ATGAACGATAAAGGTGTTTCAAGAAACGATGATTTGAACGACGATGATTTGAACGACGATGATTTGAACGACGATGATTTGATGTCGTTTGAAAATGAGATGATACAGGCGGGTCTGTTAGCATCTTGCTCCAACCGCCGCTGCTCCGATGGAGAGTGTAGCTCCGCTTCCGCTGTTGTCGCCGCCGCTCATGACGATAATCTTGATTCTAATCACAAGCGCGCTAAAGTTTACTATGATTTCGATGGCTTTCGTTGTGTTTATGATCATATTCAAGGCTCACCTTTTCAACCTACCAGTGACGTCGATACTTGTCATGATGATTCTGGGATGATGTTTACTGGTGAGGAGAATAACTTTGATTCTAGCTATGCGAAAGACAATGAAGGCGATGGCTGTGACATGTCAGAAGTAGAAGATACGAATGTCACAATGGATCTTTCGGATGACTTGTTGCATATGGTTTTCTCATTTTTGGATCATACCAATCTGTGCAAAGCTGCCTTAGTCTGTAAGCAGTGGCGAACTTCTAGTGCTCATGAAGATTTCTGGAAGAGTTTGAATTTTGCTAATCGGAACATATCTGTAGAGCAATTTGAGGACATATGCAGGCGTTATCCTAATGCCTTGGCAGTGAGCATATCTGGTCCTGAGATTCATGTTCTTGCCATGAAGGCTATCTCATTGTTAAGAAATCTCGAGGTTTTAAAATTGGGAAGAGGACATATAGATGATAGTTTTTTCCATGTTTTGTCTGATTGTTCAATGTTGAAAAAACTGAGAATCTGTGATGCTACACTTGGTGGTGGTGTTCTGGAGATACCTATTGATCATGACAGGTTACGTCATCTTAAATTAAAAAAATGCCGTGTGATGCGCATAACAGTCAGGTGCCCACAACTTGAAACTATGTCATTAAAGCGCAGTAACATGGTACAAGCTGCTCTTAATTGCCCTCTTTTGCGCAAACTTGACATAGGCTCTTGCCACAAACTTCCTGATTCTGCAATTCGCTTAGCTGTAACTTCATGCCCACAGTTAGTGTCGTTGAATATATCTAATTGCTCATGTGTTAGTGATGAAACACTACGTGAAATATCCCAGACTTGTGCTAGTCTCAGTTTCCTTGATGCATCCTACTGCCCAAACATATCCTTGGAGTCTGTTAGACTGCCCATGTTGACAGTTCTTAAGCTTCACAGTTGTGAGGGTATCACTTCAGCATCAATGGCTGCAATATCTCATAGCTCCCTGTTGGAGGTTTTGGATCTTTATAATTGTAGTCTATTGACTTCAGTGTCTCTGGATCTTCCACATTTGCAGAATATTAGATTGGTACACTGCCGCAAATTTACTGATTTGAAATTGAGGGCTATAGTGCTTTCTTCTATGCTGGTGTCCAACTGCCCTGCGCTTCAGCGCATCAACATAACTTCAAATTCACTTCAAAAATTAACAATGCCAAAGCAGGGCAGCTTAAACACAGTAGCTCTGCAATGCCAATCTTTACAAGAAGTGGATCTCTCTGAGTGTGAATCTTTGACAAACTCTGTATGCGATGTTTTTAGTGATGGTGGAGGATGTCCGATGTTGAAATTATTAGTTCTTGATAGTTGTGAGAGTTTGACATCAGTTCGATTCATCAGTACCTCTTTAGCCAGTCTCTCTCTTGGTGGTTGCCGAATAACAAATATTGAGCTCGGATGTCCTAATCTCGAGAAAGTTATTTTGGATGGGTGTGATCATTTGGAAAGAGCATCGTTTTGTCCTGTTGGTCTTCGGTCTCTAAACTTAGGAATATGCCCAAAATTGAACATGCTCAGCATTGAAGCACCATTTATGGTTTCACTCGAGTTGAAAGGATGTGGCTTACTATCCAAAGCATTCATTAATTGTCCACTCCTAACATCTTTGGATGCTTCCTTTTGCAGCCAACTAACAGATGAGGACTTGTCCGCGACAACTGCATCATGCCCACTAATTGAATCACTAATATTGATGTCTTGCGCATCAATTGGTTCAGATGGACTCCGTTCTCTGCATTGGCTTCCTAATTTAACTGTTCTTGACTTATCATACACTTTCTTGGTAAACTTGCAGCCTGTTTTTGAATCTTGTTCACAGTTAAAGGTGTTAAAGTTGCAGGCATGCAAATATCTCACTGACACCTCTCTCGAACCTCTTTACAAAGGTGCTTTACCAGCACTTCAGGAGTTGGACTTGTCTTATGGAACTCTCTGTCAATCTGCCATAGAGGAGCTTCTTGCCTCCTGCACAAACCTCACACATGTAAGCTTGAATGGCTGTGTGAATATGCATGATTTGAATTGGGGGTGCAGACGCAGTTGTGTGCAGATTAACGAGTTGGGTGCTTTTAACAGCCCATTTGGTGCAAGTTCCCACGAGAAGATAGCTGAAGCAAATGAGCAGTCCACCCGCTTACTGCAGAATCTCAACTGTGTGGGATGTCGTAATATTAGGAAGGTTGTCATTCCAAATTGTTTCCATTTATTATATTTAAACCTTTCACTCTCAGCAAATTTGAAGGAGGTTGATGTTACTTGTCTCAACCTGAGCTTTCTTAATTTAAGCAATTGTTCCTCTTTGGAAATTTTGAAGCTATTGTGTCCGAGATTGTCCAGTCTATTCCTTCAGTCTTGCAATATTGATGAGGAAGCTCTTGAAGCTGCTATTTCAAAATGCTCTATGCTGGAGACTCTTGATATTCGCTTCTGTCCAAAGATATGCTCAATGACTATGGGGAGGTTACGTGCAGTATGTCCTAGTTTGAAGCGTATATACAGCAGCAGCTTGTTAAATTGA 2823 0.4127 MNDKGVSRNDDLNDDDLNDDDLNDDDLMSFENEMIQAGLLASCSNRRCSDGECSSASAVVAAAHDDNLDSNHKRAKVYYDFDGFRCVYDHIQGSPFQPTSDVDTCHDDSGMMFTGEENNFDSSYAKDNEGDGCDMSEVEDTNVTMDLSDDLLHMVFSFLDHTNLCKAALVCKQWRTSSAHEDFWKSLNFANRNISVEQFEDICRRYPNALAVSISGPEIHVLAMKAISLLRNLEVLKLGRGHIDDSFFHVLSDCSMLKKLRICDATLGGGVLEIPIDHDRLRHLKLKKCRVMRITVRCPQLETMSLKRSNMVQAALNCPLLRKLDIGSCHKLPDSAIRLAVTSCPQLVSLNISNCSCVSDETLREISQTCASLSFLDASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAISHSSLLEVLDLYNCSLLTSVSLDLPHLQNIRLVHCRKFTDLKLRAIVLSSMLVSNCPALQRINITSNSLQKLTMPKQGSLNTVALQCQSLQEVDLSECESLTNSVCDVFSDGGGCPMLKLLVLDSCESLTSVRFISTSLASLSLGGCRITNIELGCPNLEKVILDGCDHLERASFCPVGLRSLNLGICPKLNMLSIEAPFMVSLELKGCGLLSKAFINCPLLTSLDASFCSQLTDEDLSATTASCPLIESLILMSCASIGSDGLRSLHWLPNLTVLDLSYTFLVNLQPVFESCSQLKVLKLQACKYLTDTSLEPLYKGALPALQELDLSYGTLCQSAIEELLASCTNLTHVSLNGCVNMHDLNWGCRRSCVQINELGAFNSPFGASSHEKIAEANEQSTRLLQNLNCVGCRNIRKVVIPNCFHLLYLNLSLSANLKEVDVTCLNLSFLNLSNCSSLEILKLLCPRLSSLFLQSCNIDEEALEAAISKCSMLETLDIRFCPKICSMTMGRLRAVCPSLKRIYSSSLLN 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0281 940 MobiDBLite consensus disorder prediction 1 25 - -
Lal21g0281 940 Gene3D Ribonuclease Inhibitor 609 700 IPR032675 -
Lal21g0281 940 ProSiteProfiles F-box domain profile. 141 187 IPR001810 GO:0005515
Lal21g0281 940 SMART LRR_CC_2 876 900 IPR006553 -
Lal21g0281 940 SMART LRR_CC_2 500 525 IPR006553 -
Lal21g0281 940 SMART LRR_CC_2 658 683 IPR006553 -
Lal21g0281 940 SMART LRR_CC_2 318 343 IPR006553 -
Lal21g0281 940 SMART LRR_CC_2 901 926 IPR006553 -
Lal21g0281 940 SMART LRR_CC_2 706 731 IPR006553 -
Lal21g0281 940 SMART LRR_CC_2 344 369 IPR006553 -
Lal21g0281 940 SMART LRR_CC_2 569 594 IPR006553 -
Lal21g0281 940 SMART LRR_CC_2 528 558 IPR006553 -
Lal21g0281 940 SMART LRR_CC_2 391 416 IPR006553 -
Lal21g0281 940 SMART LRR_CC_2 758 789 IPR006553 -
Lal21g0281 940 SMART LRR_CC_2 437 462 IPR006553 -
Lal21g0281 940 SMART LRR_CC_2 632 657 IPR006553 -
Lal21g0281 940 PANTHER OS10G0396666 PROTEIN 65 901 - -
Lal21g0281 940 Gene3D Ribonuclease Inhibitor 701 940 IPR032675 -
Lal21g0281 940 Gene3D Ribonuclease Inhibitor 391 608 IPR032675 -
Lal21g0281 940 SUPERFAMILY RNI-like 700 933 - -
Lal21g0281 940 SUPERFAMILY RNI-like 168 434 - -
Lal21g0281 940 SUPERFAMILY F-box domain 146 176 IPR036047 GO:0005515
Lal21g0281 940 SMART fbox_2 147 187 IPR001810 GO:0005515
Lal21g0281 940 Gene3D Ribonuclease Inhibitor 139 390 IPR032675 -
Lal21g0281 940 PANTHER OS10G0396666 PROTEIN 65 901 IPR044703 GO:0010252|GO:1905393
Lal21g0281 940 Pfam F-box-like 149 188 IPR001810 GO:0005515
Lal21g0281 940 SUPERFAMILY RNI-like 492 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0281 Lal-Chr21 1858728 1865107 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0281 - - lang:109343805 1689.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0281 21 1858728 1865107 Lal21g0281 21 1858728 1865107 ECH
Lal17g0168 17 1025278 1031379 Lal21g0281 21 1858728 1865107 LSH