Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0168 ATGGACGACAAAGTCGTTTCGGGAAACGACGATGCTTTGATGTCGTTTCAAAATGACATGGTACGAGCGTGTCCGTTAGTCTCTTGCTCCAATCGGCGCCGTTCCCATGGAGAGAGTAGCTCCGCTTCCGCTGTTGTCCACGCCGCCAACGACAATCGTCATTCTCACAATAAGCGCGTCAAAATTTACTATGACTTCGAAAGCCTTCATTCTGAAACTGAAGCAGCATCTTCAAATACTGGGACATCTAGGGCACCTGCTGACTATGGTGATTATGATCATTTTCGAGGCTCGCCTCTTCAACCTACCAATGATGGTGATGATTTTGGGATGGTGTCTACGGGTGAGGAGAATAACTTCGATTCTAGTCGTGTGAAAGTCAATGGAGGGGATGACTGTGACATGTCAGAAGTAGAAGATGCAAAGGTCACAATAGATCTATCGGATGACTTGTTGCATAAGGTTTTCTCATTTTTGGATCATACCAATCTCTGCAAAGCTGCCTCAGTCTGTAGGCAATGGCGATCTGCTAGTGCTCATGAAGATTTCTGGAAGAGATTGAATTTTGAAAATCGGAAAATATCTGCAGAGCAATTTGAGGACATATGTAGGCGATATCCTAATGCCATGGCAGTGAGCATATCTGGTCCTGAAACTTTTGTGCTTGCCATGAAGGCTATCTCTTTGTTAAGAAATCTTGAGGTTTTAAAATTGGGAAGAGGACATATAGATGATAGTTTTTTCCATGCTTTGGCCGATTGTTCTATGTTGAAAAAACTGAGAATCAGTTATGCTACACTTGGTGGTGGTGTTCTGGACATACCTATTGATCATGACAGGTTATGTCATCTTAAATTAAAAAAATGCCGTGTGATGCGCATAACAGTCAGGTGCCCACTACTTGAAACCATGTCATTAAAGCGCAGTAACATGGTTCAGGTTGTTCTTAATTGCCCCCTTTTGCAAAAACTTGACATAGGCTCTTGCCACAAGCTTCCTGATTCTGCAATTCGCTTAGCTGCAACTTCATGCCCACAATTAGTGTCGTTGAATATGTCTAATTGTTCATGTGCTACTGATGAAACGCTACTTGAAATATCCCAGACTTGTGCTGGTCTTAATTTCCTTGATGCATCTTACTGCCAAAACATAACCTTGGAGTCTGTTAGACTGCCCATGTTGACAGTTCTTAAGCTTCACAGTTGTGAGGGCATCACTTCAGCATCAATGGCTGCAATATCTCATAGTTCTCTGTTGGAGGTCTTGGAGCTTTATAATTGTAATCTATTGACTTCAGTGTCTTTGAATCTTCCACATTTGCAGACTATTAGATTAGTACACTGCCGCAAATTTACTGATTTGAACTTGAGGGCTATAATGCTCTCTTCTATGCTGGTGTCCAATTGCCCTGCGCTCCAGAGCATCAATATCACTTCAAATTCACTTCAAAAATTAACAATGCCAAAGCAGGGCAGCTTAAACACATTAGCTCTGCAATGCAATTCTCTACAAGAAGTGGACCTCTCTGAGTGTGAATCTTTGACAAACTCTCAATGTGATGTTTTTAGTGATGGTGGAGGATGCCCGATGTTGAAATTGTTAGTTCTTGATAGTTGCGAGAGTTTGACATCAGTTCGATTCATCAGTACCTCTTTAGTCAGTGTCTCCCTTGGTGGTTGCCCAATAACAAATCTCGATCTCAAATGTCCTAATCTTGAGAAAGTTATTTTGGATGGTTGTGATCATTTGGAAAGAGCATCATTTTGTCCTGTTGGTCTTCGGTCTCTCAACTTAGGAATATGCCCAAAGTTGAGCATGCTCAGCATTGAAGCACCATTTATGGTCTCACTCGAGTTGAAAGGATGTGGCTTACTATCCAAAGCATTCATTAATTGTCCACTCCTAACATCTCTGGATGCTTCCTTTTGCAGCCAACTAACAGATGAGGACTTGTCTGCGTCAACTGCATCATGCCCACTAATTGAATCATTAATATTGATGTCTTGTGCATCAATTGGTTTGGATGGACTCCGTTCTCTGTATTGGCTTCCACATTTAAATGTTCTTGACTTATCATACACTTTCGTGGTAAACTTGGAGCCAGTTTTTGAATCTTGTTCACGGCTAAAGGTGTTAAAGTTGCAGGCATGCAAATATCTCACTGACACATCACTCGAACCTCTTTACAAAGAAGGTGCTTTACCAGCACTTCAGGAGTTGGACTTGTCTTATGGAACTCTCTGCCGGTCTGCCATAGAGGAGCTTCTTGCTTCCTGCACAAACCTCACACATGTAAGCTTGAATGGCTGTGTGAATATGCATGATTTGAATTGGGGGTGCAGACACAGTTGTGGTCAGATTGACGAGTTGGGTGCTGTTAACACACCATTTGGAGCTTCTCATGAGAAGATACGTGAAGCAAGTGAGCAGTCAACCCGCTTATTGCAGAATCTCAACTGTGTTGGTTGCCCTAATATTAGGAAGGTTGCCATTCCACATTGTTTCCATTTATTATCTTTAAACCTTTCACTCTCAGCAAATTTGAAGGAGGTTGATGTCACTTGTCTCAACCTGTGCCTTCTTAATTTAAGCAATTGTCCCTCTTTGGAAATTTTGAAGTTAGTGTGTCCGAGATTGACCACTCTATTCCTTCAGTGTTGCAATATTGATGAGGAAGTTCTTGAAGCTGCTATATCAAAATGCTCTAAGCTGGAGACTCTTGATGTTCGCTTCTGTCCAAAGATATGCTCAATGAGTATGGGGAGGTTACGAGCAGCATGCCCTAGTTTAAAGCGTATATACAGCACGTTGTCAAGCTGA 2820 0.4199 MDDKVVSGNDDALMSFQNDMVRACPLVSCSNRRRSHGESSSASAVVHAANDNRHSHNKRVKIYYDFESLHSETEAASSNTGTSRAPADYGDYDHFRGSPLQPTNDGDDFGMVSTGEENNFDSSRVKVNGGDDCDMSEVEDAKVTIDLSDDLLHKVFSFLDHTNLCKAASVCRQWRSASAHEDFWKRLNFENRKISAEQFEDICRRYPNAMAVSISGPETFVLAMKAISLLRNLEVLKLGRGHIDDSFFHALADCSMLKKLRISYATLGGGVLDIPIDHDRLCHLKLKKCRVMRITVRCPLLETMSLKRSNMVQVVLNCPLLQKLDIGSCHKLPDSAIRLAATSCPQLVSLNMSNCSCATDETLLEISQTCAGLNFLDASYCQNITLESVRLPMLTVLKLHSCEGITSASMAAISHSSLLEVLELYNCNLLTSVSLNLPHLQTIRLVHCRKFTDLNLRAIMLSSMLVSNCPALQSINITSNSLQKLTMPKQGSLNTLALQCNSLQEVDLSECESLTNSQCDVFSDGGGCPMLKLLVLDSCESLTSVRFISTSLVSVSLGGCPITNLDLKCPNLEKVILDGCDHLERASFCPVGLRSLNLGICPKLSMLSIEAPFMVSLELKGCGLLSKAFINCPLLTSLDASFCSQLTDEDLSASTASCPLIESLILMSCASIGLDGLRSLYWLPHLNVLDLSYTFVVNLEPVFESCSRLKVLKLQACKYLTDTSLEPLYKEGALPALQELDLSYGTLCRSAIEELLASCTNLTHVSLNGCVNMHDLNWGCRHSCGQIDELGAVNTPFGASHEKIREASEQSTRLLQNLNCVGCPNIRKVAIPHCFHLLSLNLSLSANLKEVDVTCLNLCLLNLSNCPSLEILKLVCPRLTTLFLQCCNIDEEVLEAAISKCSKLETLDVRFCPKICSMSMGRLRAACPSLKRIYSTLSS 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0168 939 SMART LRR_CC_2 569 594 IPR006553 -
Lal17g0168 939 SMART LRR_CC_2 823 840 IPR006553 -
Lal17g0168 939 SMART LRR_CC_2 706 731 IPR006553 -
Lal17g0168 939 SMART LRR_CC_2 500 525 IPR006553 -
Lal17g0168 939 SMART LRR_CC_2 632 657 IPR006553 -
Lal17g0168 939 SMART LRR_CC_2 391 416 IPR006553 -
Lal17g0168 939 SMART LRR_CC_2 876 900 IPR006553 -
Lal17g0168 939 SMART LRR_CC_2 658 683 IPR006553 -
Lal17g0168 939 SMART LRR_CC_2 318 343 IPR006553 -
Lal17g0168 939 SMART LRR_CC_2 437 462 IPR006553 -
Lal17g0168 939 SMART LRR_CC_2 901 926 IPR006553 -
Lal17g0168 939 SMART LRR_CC_2 528 558 IPR006553 -
Lal17g0168 939 SMART LRR_CC_2 759 786 IPR006553 -
Lal17g0168 939 SMART LRR_CC_2 344 369 IPR006553 -
Lal17g0168 939 ProSiteProfiles F-box domain profile. 141 187 IPR001810 GO:0005515
Lal17g0168 939 SUPERFAMILY F-box domain 146 177 IPR036047 GO:0005515
Lal17g0168 939 MobiDBLite consensus disorder prediction 31 52 - -
Lal17g0168 939 Pfam F-box-like 149 189 IPR001810 GO:0005515
Lal17g0168 939 SUPERFAMILY RNI-like 168 434 - -
Lal17g0168 939 Gene3D Ribonuclease Inhibitor 794 939 IPR032675 -
Lal17g0168 939 PANTHER OS10G0396666 PROTEIN 50 901 IPR044703 GO:0010252|GO:1905393
Lal17g0168 939 PANTHER OS10G0396666 PROTEIN 50 901 - -
Lal17g0168 939 Gene3D Ribonuclease Inhibitor 611 699 IPR032675 -
Lal17g0168 939 Gene3D Ribonuclease Inhibitor 389 462 IPR032675 -
Lal17g0168 939 Gene3D Ribonuclease Inhibitor 700 790 IPR032675 -
Lal17g0168 939 MobiDBLite consensus disorder prediction 32 50 - -
Lal17g0168 939 SMART fbox_2 147 187 IPR001810 GO:0005515
Lal17g0168 939 Gene3D Ribonuclease Inhibitor 463 610 IPR032675 -
Lal17g0168 939 Gene3D Ribonuclease Inhibitor 140 388 IPR032675 -
Lal17g0168 939 SUPERFAMILY L domain-like 614 922 - -
Lal17g0168 939 SUPERFAMILY L domain-like 368 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0168 Lal-Chr17 1025278 1031379 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0168 - - lang:109343805 1540.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0168 17 1025278 1031379 Lal17g0168 17 1025278 1031379 ECH
Lal17g0168 17 1025278 1031379 Lal21g0281 21 1858728 1865107 LSH