Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0253 ATGGCAACTTTATTCAATTGGGGTATGAAAGAGGGTCATAGGGGAACCCCAGTGGTGGTTAAGATGGAGAATCCTAATTGGTCAATGGTTGAGCTTGAGGGTCCTTCAGAGGAAGATTTTCTCATCACAAACCCTTCTTCTGTTGGTGCAAGAGACAAAAGAAGAGGCAAAAACGCTAAGCAACTCACATGGGTTCTTCTCCTCAAAGCTCAAAGAGCAGCTGGTTGTTTAACCTCCATTGCCCCTGCATTGTTGACACTTGTCTCCGCCGTGAAACGCCGTGTAGCTTCCGGAAGAACTGATGCTGATGTTGACAACGATGGTGTTGGCAGAGAGAAGGAGAACCCTACTGTGAAGAGCAGTTTCTATTCATGTATCAAAGTGTTTCTATTTGTGTCTGTGCTTCTTTTGTGTTTTGAGGTGGCTGCATATTTTAAAGGTTGGCATTTTGGTGCACCTAATCTTCAGTTGGGTTATTTGTATTGGGCACCTGCTTTTGGAGTTAAGGATTTTTTCGAATGGGTTTATGCACGATGGGTTTTGATTCGGGTTGAATACCTTGCCCCTCCTCTGCAGTTTCTTGCCAGTGCCTGTATTGTGCTGTTCATTATTCAGAGTTTGGATAGGTTGGTGCTTTGTTTAGGATGTTTTTGGATTAGATTTAAGAAAATCAAGCCTGTTCTAAAAGAGGGTGCTTTAGATCTTGAGACTGGGGAGAAGGGTTTCTTTCCTATGGTGCTAGTGCAGATTCCTATGTGTAATGAGAAAGAGGTCTATCAGCAATCAATTGCTGCCGTTTGTAATTTGGATTGGCCAAAGTCCAAGTTTCTAATTCAAGTTCTGGATGATTCAGATGACCCAATTACGGTATCGCTAATCAAGGAGGAGGTTCAAAAATGGCAACGAGAGGGTGCCAACATTTTGTACCGGCATCGGGTAATTAGAGACGGATACAAGGCTGGTAATCTGAAATCTGCCATGAATTGTAGCTATGTGAAAGACTATGAATTTGTTGCAATCTTCGATGCCGATTTTCAGCCTACTCCAGATTTCCTTAAAAAAACTGTCCCTCATTTTAAGGATAATGATGAATTAGGGCTTGTTCAAGCAAGATGGTCCTTTGTGAACAAGGATGAGAACCTGTTAACAAGGTTACAGAACATTAATTTATCATTCCATTTTGAGGTGGAACAACAAGTCAATAGTGTTTTCATTAATTTCTTCGGGTTCAATGGAACGGCTGGAGTATGGAGAATAAAGGCTTTGGAGGAAGCTGGGGGTTGGTTGGAGAGAACCACTGTTGAGGACATGGATATTGCTGTTAGAGCTCATCTTCACGGCTGGAAATTTATTTTCCTCAATGATGTTGAGTGCCAATGTGAGCTACCAGAATCTTATGAAGCTTATAGGAAACAGCAGCATAGATGGCATTCTGGGCCAATGCAATTGTTTCGACTTTGTTTGCCTGACATCATAAAGGCCAAGATAAGCGTATGGAAGAAATTCAACATGATATTTCTCTTCTTTCTGCTTAGAAAGTTGATACTACCATTCTATTCATTTACCTTGTTCTGTATAATTCTCCCAATGACAATGTTTGTACCCGAAGCCGAGCTTCCTGCTTGGGTTGTTTGTTATATCCCTGCTACAATGTCATTTCTTAACATTCTTCCAGCTCCAAAAGCTTTCCCCTTCATTGTCCCTTATCTCCTATTTGAAAACACAATGTCAGTTACTAAATTCAATGCCATGATCTCCGGCCTATTCCAGCTCGGTAGCGCATACGAGTGGGTTGTCACTAAGAAATCTGGTCGTTCCTCAGAGGGCGATCTAGTTTCATTGATTGAGAAACCAAAGCATCAAAGAGGGTCATCTGAGCCTGATCTGGAGGAAATGAAAGAGGAAATCCTAAGGCAGCAAGAGGAAAAGACTAAGAAGAACAAGACGAAGAAGAAGAAGCATAATAGAATATACATGAAGGAGCTTGCTTTGGCATTTCTACTTCTAACAGCCTCAGCAAGGAGTCTCCTTTCTGCTCAGGGAATTCATTTCTACTTCTTGTTATTCCAAGGAATTTCATTTCTGTTAGTTGGTCTAGATTTGATTGGTGAACAAGTAGACTAA 2124 0.4143 MATLFNWGMKEGHRGTPVVVKMENPNWSMVELEGPSEEDFLITNPSSVGARDKRRGKNAKQLTWVLLLKAQRAAGCLTSIAPALLTLVSAVKRRVASGRTDADVDNDGVGREKENPTVKSSFYSCIKVFLFVSVLLLCFEVAAYFKGWHFGAPNLQLGYLYWAPAFGVKDFFEWVYARWVLIRVEYLAPPLQFLASACIVLFIIQSLDRLVLCLGCFWIRFKKIKPVLKEGALDLETGEKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKFLIQVLDDSDDPITVSLIKEEVQKWQREGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKKTVPHFKDNDELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNSVFINFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIKAKISVWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKPKHQRGSSEPDLEEMKEEILRQQEEKTKKNKTKKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0253 707 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 237 461 IPR029044 -
Lal21g0253 707 Coils Coil 629 649 - -
Lal21g0253 707 PANTHER - 6 706 - -
Lal21g0253 707 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 6 706 - -
Lal21g0253 707 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 522 IPR029044 -
Lal21g0253 707 Pfam Glycosyl transferase family group 2 338 543 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0253 Lal-Chr21 1666838 1670980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0253 1 707 Miscellaneous Gene Families AT4G07960 78.194 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0253 - - gmx:100805969 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0253 21 1666838 1670980 Lal21g0253 21 1666838 1670980 ECH
Lal17g0142 17 880953 884689 Lal21g0253 21 1666838 1670980 LSH