Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0142 ATGGCAACTTTATTCAATTGGGGTGTGAAAGAGGGTAACAGGGCAACCCCAGTGGTGGTGAAAATGGAGAACCCTAATTGGTCAATGGTTGAGCTTGAGGGTCCATCAGAGGAAGATTTTCTCATCACAAACCCTTCTGCTGGTGCAAGAGACAAGAGAAGAGAGAAAAACGCAAAGCAACTCACATGGGTTCTTCTCCTCAAAGCTCATAGAGCAGCTGGTTGCTTAACCTCCATTGCCCCTGCATTGTTGACATTAGTTTCTGCCGTGAAGCGCCGTGTAGCCTCCGGAAGAACCGATGCTGATGTCGACAACGACCGGGTTGGCAGGGAGAAGGAGAACCCTACTGTTAAGAGCAGGTTTTATTCATGTATCAAAGTGTTTCTAGTTGTGTCTGTGCTTCTTTTATGTTTTGAGGTGGCTGCTTACTTTAAAGGTTGGCATTTTGGTGCATCTAATCTTCAGTTGGATTATTTGTATTGGGCACCTGCTTTTGGAGTCAAGGATTTTTTCAATTGGGTTTATTCGCGGTGGGTTTTGATTCGGACGGAATACTTTGCTCCTCCTCTCCAGTTTCTTGCAAATGCTTGTATTGTGCTGTTTTTCATTCAGAGTTTGGATAGGTTGGTTCTTTGTTTAGGTTGTTTTTGGATCAGATTTAAGAAAATCAAACCTGTTCCAAAAGAAGGTGTTTTAGATCTTGAGTCTGGGGAGAAGGGTTTCTTTCCTATGGTGCTAGTGCAGATACCTATGTGTAACGAGAAAGAGGTTTATCAACAATCAATTGCCGCCGTTTGTAATTTGGATTGGCCAAAGTCTAAGTTTCTAATTCAAGTTCTGGATGATTCGGATGACCCAATTACAGTATCACTGATCAACGAGGAGGTTCAAAAATGGCAACAAGAGGGTGCCAACATTTTGTACCGGCATCGGGTAATTAGAGATGGGTACAAGGCTGGTAATCTGAAATCTGCCATGAATTGTAGCTATGTGAAAGACTATGAGTTTGTTGCAATTTTTGATGCCGACTTTCAACCTACTCCAGACTTCCTTAAAAAAACTGTTCCTCACTTTAAGTCAAATGATCCACTTGGCGAAACTATACCGCAGGATAATGATGAATTAGGGCTTGTTCAAGCAAGATGGTCCTTTGTGAACAAGGATGAGAACCTGCTAACAAGGTTGCAGAACATTAATTTGTCATTCCATTTTGAGGTGGAACAGCAAGTCAATAGTGTTTTCATTAATTTCTTTGGGTTCAATGGAACGGCTGGAGTATGGAGAATAACGGCTTTGGAAGAAGCTGGGGGTTGGTTGGAGAGGACCACTGTCGAGGACATGGATATCGCTGTTCGAGCTCATCTTCATGGCTGGAAATTTATTTTCCTCAATGACGTCGAGTGCCAATGTGAGCTACCCGAATCTTATGAAGCTTACAGGAAACAGCAACATAGATGGCATTCTGGGCCAATGCAATTGTTCCGCCTTTGTTTGCCTGACATCATAAAGGCCAAGATAAGCGTATGGAAGAAATTCAATATGATATTTCTCTTCTTCCTTCTCAGAAAACTGATATTACCATTCTATTCATTCACCTTATTCTGTATAATTCTCCCCATGACAATGTTTGTACCTGAAGCCGAGCTTCCTGCGTGGGTTGTTTGTTATATCCCTGCTACCATGTCATTTCTTAACATTCTTCCGGCTCCAAAAGCCTTCCCCTTTCTTGTTCCTTATCTCCTATTTGAGAACACCATGTCAGTTACCAAATTCAATGCCATGATCTCCGGCCTATTCCAGCTTGGCAGCGCATATGAATGGGTTGTCACTAAGAAATCCGGTCGTTCCTCAGAGGGTGATCTAGTTTCATTGGTTGAGAAAACAAAGCATCAAAGAGGGTCATCCGCGCCTGATCTCGAGGAAATAAAAGAGGAAATCCAAAGGCAGCAAGAGGAAAAGGTGGCTAAGAAGAAAAAGAAGAAGCATAACAGAATATACAAGAAGGAACTTGCTTTGGCATTTCTACTTCTAACAGCCTCAGCAAGGAGTCTCCTCGCTGCCCAGGGAATCCATTTCTACTTCTTGCTATTCCAGGGCATTTCATTTCTGTTAGTTGGTCTAGACTTGATTGGTGAACAGGTTGACTAA 2148 0.426 MATLFNWGVKEGNRATPVVVKMENPNWSMVELEGPSEEDFLITNPSAGARDKRREKNAKQLTWVLLLKAHRAAGCLTSIAPALLTLVSAVKRRVASGRTDADVDNDRVGREKENPTVKSRFYSCIKVFLVVSVLLLCFEVAAYFKGWHFGASNLQLDYLYWAPAFGVKDFFNWVYSRWVLIRTEYFAPPLQFLANACIVLFFIQSLDRLVLCLGCFWIRFKKIKPVPKEGVLDLESGEKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKFLIQVLDDSDDPITVSLINEEVQKWQQEGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKKTVPHFKSNDPLGETIPQDNDELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNSVFINFFGFNGTAGVWRITALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIKAKISVWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKAFPFLVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEKTKHQRGSSAPDLEEIKEEIQRQQEEKVAKKKKKKHNRIYKKELALAFLLLTASARSLLAAQGIHFYFLLFQGISFLLVGLDLIGEQVD 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0142 715 Coils Coil 639 659 - -
Lal17g0142 715 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 236 471 IPR029044 -
Lal17g0142 715 PANTHER - 12 714 - -
Lal17g0142 715 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 12 714 - -
Lal17g0142 715 SUPERFAMILY Nucleotide-diphospho-sugar transferases 245 532 IPR029044 -
Lal17g0142 715 Pfam Glycosyl transferase family group 2 337 554 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0142 Lal-Chr17 880953 884689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0142 1 715 Miscellaneous Gene Families AT4G07960 76.786 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0142 - - gmx:100805969 1191.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0142 17 880953 884689 Lal17g0142 17 880953 884689 ECH
Lal17g0142 17 880953 884689 Lal21g0253 21 1666838 1670980 LSH