Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0105 ATGAGGACTGAAATTAAGGATGAAACTCAAGCGCCATTCAGTGATAATAATTTCTTCAGCTCTAGATTCTCACTTCTTGCTTCCAAAGATCGTGATTTTCTGCTCTCTCCAAATGGGGCACAAGTGAAAGTTTCTGATCTTGAAGGGAAAGTAGTGGGTCTCTTATTCGGTGCCAAGTGGTACCCACCATGCCATGGATTCACCCAAATACTAGTTTGTATCTATGAGGAGCTTAAAAACAGTGACCCTCAATTTGAGATTGTATATGTGTCCTCTGATGAAGATTTGGATGCTTTTAATAACTTCTATGGAAACATGCCGTGGCTCTCAGTTCCATTTTCTGTTTTAGAAACAAAGAAAGCGTTGAATAGAATGTATGAGGTGGAAGGGATTCCATGCTTCATTATTTTACAACCCTATGAGACTAATAAAGAGGATTATGCAGCCATTAGAAATGGGGTTGAACTTATTTATAGGTATGGAATTCAAGCTTATCCGTTTAGTAAAGAGAAGTTGGAGCAGTTGCATGAGGCAGAAAGAGAGAAGCGTGATAATCAGACACTTATTAATTTGCTTGCAAACCAATATAGAGACTATGTTTTGAGTCACACTGGATTACAAAGAAAGGTACCTATTGCTTCTTTAGTGGATAAAACTATTGGACTTTACTTCTCAGCCGAGTGGTGCGTGCCATGCGTGAAATTCACTCCCAAACTAATTTCCATTTATGAGAAGATAAAGCAAGAGTTGGCTGAAAAAGGAAAAGATGAGGACTTTGAAATTGTGTTAATTTCCAGTGACCTTGAGCAAGCATCTTTTGACTCCTTTTACAGTAAAATTCCTTGGTTAGCATTAACATTTAAAGATCCAGAGATCAAAAACCTTGCTAGGCATTTTGATGTGGAAGGGATACCATCTTTGGTAATTATAGGACCTGATGGTAAAACAATTACTTGTCTTGGAAGGAACTTAATAAACTTGTACCAAGAAAATGCGTACCCTTTCACTGATGCTAAAGTTGAGTTGCTAGAGAAACTGCTTGAAGAAGAAGCAAAAGATCTTCCAAGATTGGTGTATCATGAAGGGCATAGACATGATTTGAATTTAGTCTCTGAAGGGAATTGA 1125 0.3778 MRTEIKDETQAPFSDNNFFSSRFSLLASKDRDFLLSPNGAQVKVSDLEGKVVGLLFGAKWYPPCHGFTQILVCIYEELKNSDPQFEIVYVSSDEDLDAFNNFYGNMPWLSVPFSVLETKKALNRMYEVEGIPCFIILQPYETNKEDYAAIRNGVELIYRYGIQAYPFSKEKLEQLHEAEREKRDNQTLINLLANQYRDYVLSHTGLQRKVPIASLVDKTIGLYFSAEWCVPCVKFTPKLISIYEKIKQELAEKGKDEDFEIVLISSDLEQASFDSFYSKIPWLALTFKDPEIKNLARHFDVEGIPSLVIIGPDGKTITCLGRNLINLYQENAYPFTDAKVELLEKLLEEEAKDLPRLVYHEGHRHDLNLVSEGN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0105 374 ProSiteProfiles Thioredoxin domain profile. 190 348 IPR013766 -
Lal21g0105 374 Gene3D Glutaredoxin 26 168 - -
Lal21g0105 374 Gene3D Glutaredoxin 194 337 - -
Lal21g0105 374 ProSiteProfiles Thioredoxin domain profile. 24 159 IPR013766 -
Lal21g0105 374 SUPERFAMILY Thioredoxin-like 35 139 IPR036249 -
Lal21g0105 374 PANTHER THIOREDOXIN 23 372 - -
Lal21g0105 374 SUPERFAMILY Thioredoxin-like 209 317 IPR036249 -
Lal21g0105 374 Coils Coil 175 195 - -
Lal21g0105 374 Pfam Thioredoxin-like 49 139 IPR012336 -
Lal21g0105 374 Pfam Thioredoxin-like 218 315 IPR012336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0105 Lal-Chr21 718159 724076 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0105 K17609 - gmx:100815038 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0105 21 718159 724076 Lal21g0105 21 718159 724076 ECH
Lal17g0052 17 308552 312991 Lal21g0105 21 718159 724076 LSH