Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0052 ATGAAGGATGATACTGAAGCTGATGAGGTGAGTAATAATGGCTACTTTGGAGAAGTCTCCAACTCTAGGTTCTCATCACTGCTTACTTCCAAAGATCGTGATTTTCTGCTCTCTCCAAACGGGGCACAGGTGAAAGTTTCTGATCTTGAAGGTAAGGTAGTGGGTCTGTTATTCGCTGCTAACTGGTACCCACCATGCCGTGGATTCACCCAAATGCTAGTTGGTATCTACGAAGAGCTTAAAAACAGTAGTGACCCTCAATTTGAGATTGTGTATGTGTCCTCTGATGAGGATTTAGATGCTTTTAATAACTTCTATGGAATCATGCCGTGGCTTGCAGTTCCGTTCTCTGATTTGGAAACAAAGAAATTATTGAATAGAAAATATGACGTGGAAGGTATTCCATGCTTGATTATGTTGCAACCTGAGGAGAGTAATAAAGAGGATGATGCTGCGCTTCGATGTGGAGTGGAACTTATTTATCGGTATGGAATCCACGCTTATCCGTTTAGTAAGGACAAGTTGGAGCAGCTGCAAGAGGTAGAAAGAGAGAAGCGTCACAACCAGACACTTACTAACTTACTAGCAAACCAACATAGAGACTATGTTTTGACTCACGCTGAACAAAGAAAGGTATCTGTTGCTTCTTTAGTGGGTAAAACTATTGGACTCTACTTCTCAGCAGAATGGTGCGTGCCATGTGTGAAATTCACTCCCAAACTGATTTCCATATATGAGAAGATAAATAATGAGCTAGCTGAAACAGGAGAGAATGATGAGTTTGAAATCGTGTTAGTTTCCAGTGACCGTGACCAATCATCATTTGACTCCTATTACAGCAAAATGCCTTGGTTAGCATTACCATTTAAAGACCCAGAGATTAAGAACCTTGCTCAGCACTTTGATGTTCAAGGGATACCTTGTTTGGTAATAATAGGCCCAGATGGTAAAACAATAACTTGTCATGGAAGGAACTTAATAAACTTGTACCAAGAAAATGCGTACCCTTTCACTGATGCCAAGGTTGAGATGCTAGAGAAACAACTGGAAGAAGAGGCAAAGGATTTTCCAAGATTGGTGTATCATGAAGGGCATCGCCATGATCTGAATTTGGTGTCGGATGGGAATGGAGGAGGACCCTTCATTTGTTGTGTATGTGATGAACAAGGGTCTAGTTGGGCATATCAGTGTCTCGAATGTGGCTATGAAGTACACCCCAAGTGTGTCACATCTTTAGGTCTTCATAATAATGTCTTGCTTGGCAGGTGA 1269 0.4145 MKDDTEADEVSNNGYFGEVSNSRFSSLLTSKDRDFLLSPNGAQVKVSDLEGKVVGLLFAANWYPPCRGFTQMLVGIYEELKNSSDPQFEIVYVSSDEDLDAFNNFYGIMPWLAVPFSDLETKKLLNRKYDVEGIPCLIMLQPEESNKEDDAALRCGVELIYRYGIHAYPFSKDKLEQLQEVEREKRHNQTLTNLLANQHRDYVLTHAEQRKVSVASLVGKTIGLYFSAEWCVPCVKFTPKLISIYEKINNELAETGENDEFEIVLVSSDRDQSSFDSYYSKMPWLALPFKDPEIKNLAQHFDVQGIPCLVIIGPDGKTITCHGRNLINLYQENAYPFTDAKVEMLEKQLEEEAKDFPRLVYHEGHRHDLNLVSDGNGGGPFICCVCDEQGSSWAYQCLECGYEVHPKCVTSLGLHNNVLLGR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0052 422 Gene3D Glutaredoxin 194 341 - -
Lal17g0052 422 PANTHER THIOREDOXIN 21 408 - -
Lal17g0052 422 Pfam C1 domain 364 409 IPR004146 -
Lal17g0052 422 Pfam Thioredoxin-like 219 317 IPR012336 -
Lal17g0052 422 Pfam Thioredoxin-like 51 143 IPR012336 -
Lal17g0052 422 CDD TryX_like_TryX_NRX 201 337 IPR045870 GO:0004791
Lal17g0052 422 SUPERFAMILY Thioredoxin-like 197 320 IPR036249 -
Lal17g0052 422 ProSiteProfiles Thioredoxin domain profile. 180 354 IPR013766 -
Lal17g0052 422 Gene3D Glutaredoxin 27 170 - -
Lal17g0052 422 ProSiteProfiles Thioredoxin domain profile. 26 154 IPR013766 -
Lal17g0052 422 SUPERFAMILY Thioredoxin-like 37 142 IPR036249 -
Lal17g0052 422 SMART c1_12 365 414 IPR002219 -
Lal17g0052 422 SUPERFAMILY Cysteine-rich domain 353 410 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0052 Lal-Chr17 308552 312991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0052 K17609 - gmx:100815038 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0052 17 308552 312991 Lal17g0052 17 308552 312991 ECH
Lal17g0052 17 308552 312991 Lal21g0105 21 718159 724076 LSH