Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0005 ATGAAGATGTTGAATAGCATGATCATGGAATTGGCGGCGTCATACTCGCCGCCTACATGGGCAACTTTAATTGCTGCTGTCTTTCTTCTCCTCACTGTTACTGTCTCTATATATCTTTTACTTGATCATCTCTCTGCTTATAAGAACCCTGAAGAGCAAAAGTTCCTTATTGGTGTTGTCCTTATGGTTCCCTTCTATTCTGTTGAATCTTTTGTTTCTTTGCTCAACCCATCCATCAGTTTTGTCTGTGAGATTCTCAGGGATTACTATGAATCATTTGCTATGTATTGCTTTGCTAGATACCTTGTTGCCTGTCTCGGCGGCGAGGATAGGACCATTGAATTTATGGAAAGAGAAGGCCGTTCTGCTTTCAAAACCCCTCTCCTTCATCATTCTTCTCACAACAGGGGCATTGTCAACCATCCTTTTCCTATCAACTTCTTCCTTAAACCATGGAAACTTGGTCATGCCTTCTACCAAGTTGTCAAATTCGGTATTGTTCAATATATGATAATTAAGTCTTTGACTGCTATTGCTGCCGTCATCCTTCAAGCCTTTGGTGTCTACTGTGAAGGAGAATTTAGATTGGGATGTGGGTATCCCTATTTGGCAGTGGTTCTGAATTTCAGTCAATCATGGGCATTGTACTGCCTTGTTCAATTTTATACTATTACAAAGGAAGAATTGGCACATATAAAGCCATTGGCCAAATTTTTGACATTTAAATCAATTGTGTTCCTTACTTGGTGGCAAGGGGTGGCAATCGCTCTCCTTTACACCTTTGGGTTGTTCAAAAGTCCCATCGCACAAGGCTTGCAGTTTAAGTCAAGTGTCCAAGATTTCATCATTTGCATCGAGATGGGCATTGCTTCCATAGTTCACCTGTATGTGTTTCCAGCAAAGCCTTATGAGCTAATGGGAGACCGCCATCCTGGAATAGTTTCAGTTCTTGGAGATTACTCTGCTGACTGCCCTCTTGACCCTGATGAGATTAGGGACAGTGAGCGACCCACAAAACTACGTCTTCCTGCACCTGACGTGGGTGCCAAGAGTGGGATGACAATTAGAGAGAGTGTTCGTGATGTCGTTATTGGTGGTGGTGGATATATTGTGAATGATGTGAAGTTCACTGTCCATCAAGCAGTGGAGCCTGTAGAAAAGGGGATCAACAGGTTCAATGAAAAATTACACAAAATCTCCGAAAACATTAAGAAGCATGACAAAGATGGAAGAAGAACAAAGGATGATAGTTCCATCGGCTCATCATCACCTGCAAAGAGGGTGATTCGGGGAATTGATGACCCCCTCTTGAACGGGAGTGTTAGCGATAGTGGGATATTGAGGGGAAAGAGTAAGAAACATTGTAAAAAATCTGGATATACAAGTGGAGAGAGTGGAGGAGAGAGTGATCTTAGCTATGGAGGCTATCAAATTAGAGGGCGTAGGTGGGTTACCAAAGAGTAG 1464 0.4255 MKMLNSMIMELAASYSPPTWATLIAAVFLLLTVTVSIYLLLDHLSAYKNPEEQKFLIGVVLMVPFYSVESFVSLLNPSISFVCEILRDYYESFAMYCFARYLVACLGGEDRTIEFMEREGRSAFKTPLLHHSSHNRGIVNHPFPINFFLKPWKLGHAFYQVVKFGIVQYMIIKSLTAIAAVILQAFGVYCEGEFRLGCGYPYLAVVLNFSQSWALYCLVQFYTITKEELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYTFGLFKSPIAQGLQFKSSVQDFIICIEMGIASIVHLYVFPAKPYELMGDRHPGIVSVLGDYSADCPLDPDEIRDSERPTKLRLPAPDVGAKSGMTIRESVRDVVIGGGGYIVNDVKFTVHQAVEPVEKGINRFNEKLHKISENIKKHDKDGRRTKDDSSIGSSSPAKRVIRGIDDPLLNGSVSDSGILRGKSKKHCKKSGYTSGESGGESDLSYGGYQIRGRRWVTKE 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0005 487 Coils Coil 389 409 - -
Lal21g0005 487 MobiDBLite consensus disorder prediction 402 474 - -
Lal21g0005 487 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 13 481 IPR005178 -
Lal21g0005 487 MobiDBLite consensus disorder prediction 402 416 - -
Lal21g0005 487 Pfam Organic solute transporter Ostalpha 22 303 IPR005178 -
Lal21g0005 487 PANTHER PROTEIN LAZ1 13 481 IPR031171 GO:0009626
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0005 Lal-Chr21 114888 120325 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0005 - - gmx:100777624 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0007 17 32443 37072 Lal21g0005 21 114888 120325 LSH