Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0007 ATGAAGTTGTTGAAGAGCATCATCATGGAATACTCGCCTCCTACATGGGCAACTTTAATTGGTGTTGTCTTTCTTCTCCTCACAGTTACTCTCTCTATGTATCTTTTGTTTGATCACCTCTCCGCTTACAAGAACCCTGAGGAGCAAAAGTTCCTAATTGGTGTTGTCCTTATGGTCCCCTGCTATTCTGTTGAATCTTTTGTTTCATTGGTCAATCCATCTATAAGTGTTGTTTGTGAGATTCTCAGAGATTGCTATGAATCCTTTGCTATGTATTGCTTTGGTAGATATCTTGTTGCATGTCTTGGTGGCGAAGATAGGACGATTGAATTCATGGAAAGAGAAGGCCGCTCTGCTCTCAAAGCTCCCCTCCTTCATCATCATCATTCTTCTCATAACAAGGGCATTGTCATCCATCCTTTTCCTATGAACTGCTTCTTCAAACCATGGAAACTTGGTCATGCCTTCTACCAAGTTGTCAAATTTGGTATTGTTCAATATATGATAATAAAGTCTTTGACTGCTATTACTGCGGTCATCCTTGAAGCCTTTGGAGTCTACTGTGAAGGAGAATTTAAATTGGGATGTGGGTATCCCTATTTGGCAGTGGTTCTGAACTTCAGTCAGTCATGGGCATTGTACTGCCTTGTTCAATTTTATACTGTTACAAAGGATGAATTGGCACATATAAAGCCATTGGCCAAATTCTTGACATTTAAATCAATTGTGTTCCTCACTTGGTGGCAAGGGGTGGCAATCGCTCTCCTATACACCTTTGGGTTGTTTAAAAGTCCCATCGCACAAGGTTTGCAATTTAAGTCAAGTGTCCAAGATTTCATCATTTGCATCGAGATGATTTCTGTCAATTCATCGGTAACTGATCCATCTAATGACCTTAGGTTCATGCCCCAATTATCTCTATTCTGCACTATTATAAAGTCACCAAGCTTCAATATAATACGATTGTTTTTTGGTGGAACTAGGCAATCCAATGCTAGAAAGTTCAGTGCACAGATGGGCATTGCTTCCATAGTTCACCTGTATGTGTTTCCAGCAAAGCCTTATGAGCTAATGGGAGACCATCATCCTGGAAGTGTTTCAGTTCTTGGAGATTACTCTGCTGACTGCCCTCTTGACCCTGAAGAGATTAGGGACAGTGAGCGACCCACAAAACTGCGTCTTCCTACACCTGATGTGGATGCCAAGAGTGGGATGACAATTAGAGAGAGTGTTCGTGATGTCGTTATTGGTGGTGGCGGATATATTGTGAATGACGTGAAGTTCACGGTACATCAAGCAGTGGAGCCTGTAGAAAAAGGGATCTCTAGGTTCAACGAAAAATTACACAGAATTTCTGAAAACATTAAGAAGCATGACAAAGATGGAAGAAGAACAAAGGATGATAGTTCCATCAGGTCGCCATCACCTGCAAGGAGGGTGATTCGGGGAATTGACGATCCCCTCTTGAATGGGAGTGTCAGCGATAGTGGGATATTGAGGGGGAAGACAAAGAAACACCGTAGAAAATCTGGATATACAAGTGGAGAAAGTGGAGAGAGTAGTAGTGATCTTAGCTATGGAGACTATCAAATTAGAGGCGGTAGATGGATTACCAAAGAGTAG 1623 0.4177 MKLLKSIIMEYSPPTWATLIGVVFLLLTVTLSMYLLFDHLSAYKNPEEQKFLIGVVLMVPCYSVESFVSLVNPSISVVCEILRDCYESFAMYCFGRYLVACLGGEDRTIEFMEREGRSALKAPLLHHHHSSHNKGIVIHPFPMNCFFKPWKLGHAFYQVVKFGIVQYMIIKSLTAITAVILEAFGVYCEGEFKLGCGYPYLAVVLNFSQSWALYCLVQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAIALLYTFGLFKSPIAQGLQFKSSVQDFIICIEMISVNSSVTDPSNDLRFMPQLSLFCTIIKSPSFNIIRLFFGGTRQSNARKFSAQMGIASIVHLYVFPAKPYELMGDHHPGSVSVLGDYSADCPLDPEEIRDSERPTKLRLPTPDVDAKSGMTIRESVRDVVIGGGGYIVNDVKFTVHQAVEPVEKGISRFNEKLHRISENIKKHDKDGRRTKDDSSIRSPSPARRVIRGIDDPLLNGSVSDSGILRGKTKKHRRKSGYTSGESGESSSDLSYGDYQIRGGRWITKE 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0007 540 Coils Coil 441 461 - -
Lal17g0007 540 MobiDBLite consensus disorder prediction 380 395 - -
Lal17g0007 540 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 338 534 IPR005178 -
Lal17g0007 540 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 9 286 IPR005178 -
Lal17g0007 540 Pfam Organic solute transporter Ostalpha 18 286 IPR005178 -
Lal17g0007 540 MobiDBLite consensus disorder prediction 453 473 - -
Lal17g0007 540 MobiDBLite consensus disorder prediction 453 527 - -
Lal17g0007 540 MobiDBLite consensus disorder prediction 380 399 - -
Lal17g0007 540 PANTHER PROTEIN LAZ1 338 534 IPR031171 GO:0009626
Lal17g0007 540 PANTHER PROTEIN LAZ1 9 286 IPR031171 GO:0009626
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0007 Lal-Chr17 32443 37072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0007 - - pvu:PHAVU_009G116100g 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0007 17 32443 37072 Lal21g0005 21 114888 120325 LSH