Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1260 ATGGCTGCTGTAGCTGCTTCTGGTGTTGTTGGTGGAAATGGTTATTCTTCATCTTCTTGGATGAAACTCAGAGGAAGAAGGGAAATGGGTAAGAAGGTGAATAGGGTTAAGATTTGTTGCTCTTATTCTTCTTATTCTTCTTCTTCTTCTGCTGTGATGGATCCTTATAAGACATTAAGGCTCCAATCTGGTGCCTCTGAATCTGAGGTTAGGAAAGCTTTCAGACAACTTGCTTTGCAGATTTTGCCATTTTTTGTTGTGAAGAACTGGTGTCTGTATCATCCAGATGTATGCAAAGGGAACAATTGTGGAGTGAAGTTTCATCTAATCAATGAAGCTTATGATGTTGTGATGGGCAATTTGAGGGGAGAATCAGAAGAAAGAGAAGTGAATGATGGAGGAATTGACGAGCCACTAAGGGGAATGAATGACCCAGATTGGGATATGTGGGAAGAGTGGATGGGTTGGGAAGGTGCTGGAATTCGTGACTACTCATCTCATATTAACCCTTTTATTTGA 519 0.4104 MAAVAASGVVGGNGYSSSSWMKLRGRREMGKKVNRVKICCSYSSYSSSSSAVMDPYKTLRLQSGASESEVRKAFRQLALQILPFFVVKNWCLYHPDVCKGNNCGVKFHLINEAYDVVMGNLRGESEEREVNDGGIDEPLRGMNDPDWDMWEEWMGWEGAGIRDYSSHINPFI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1260 172 PANTHER CO-CHAPERONE PROTEIN DJLA 3 172 - -
Lal20g1260 172 SMART dnaj_3 53 122 IPR001623 -
Lal20g1260 172 CDD DnaJ 54 116 IPR001623 -
Lal20g1260 172 PANTHER HEAT SHOCK PROTEIN BINDING PROTEIN 3 172 - -
Lal20g1260 172 PRINTS DnaJ domain signature 56 74 IPR001623 -
Lal20g1260 172 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lal20g1260 172 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lal20g1260 172 ProSiteProfiles dnaJ domain profile. 54 134 IPR001623 -
Lal20g1260 172 SUPERFAMILY Chaperone J-domain 51 159 IPR036869 -
Lal20g1260 172 Gene3D DnaJ domain 40 138 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1260 Lal-Chr20 17156051 17157827 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1260 - - gmx:100780336 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1260 20 17156051 17157827 Lal20g1260 20 17156051 17157827 ECH
Lal20g1260 20 17156051 17157827 Lal1g1213 1 13380602 13383099 LSH