Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1213 ATGGCTGCTGTAGCTGCTTCTGGTGTTGTTGGTGGAAATGGGTCTTCTTCTTCTTGGATGAAATTCAAAGGAAGAAAGGAAAGTAATAACAAAGTGAATAGGGTTAAGATTTTTTGCTCTTATTCTTCTTCTTCTTCTGTTATAGATCCTTATAAAACATTAAGCATAAAACCTGATGCAACTGAATCTGAGGTTAGGAAAGCTTTTAGACAACTTGCTTTGCAGTATCATCCAGATGTATGCAGAGGGAACAATTGTGGGGTGCAGTTTCACCAAATCAATGAGGCTTATGATGTTGTAATGGCCAATTTGAGAGGAGAATCAAATGAGAAAGAAGTGTATGAGGATGCAGGGATTGATGAGCCATTAAGGGGAATGAATGATCCAGATTGGGACATGTGGGAAGAATGGATGGGTTGGGAAGGAGCAGGAATTCGTGACTACTCATCTCATATTAATCCATACATTTAA 471 0.3885 MAAVAASGVVGGNGSSSSWMKFKGRKESNNKVNRVKIFCSYSSSSSVIDPYKTLSIKPDATESEVRKAFRQLALQYHPDVCRGNNCGVQFHQINEAYDVVMANLRGESNEKEVYEDAGIDEPLRGMNDPDWDMWEEWMGWEGAGIRDYSSHINPYI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1213 156 Gene3D DnaJ domain 16 108 IPR036869 -
Lal1g1213 156 Pfam DnaJ domain 49 101 IPR001623 -
Lal1g1213 156 PANTHER CO-CHAPERONE PROTEIN DJLA 3 156 - -
Lal1g1213 156 PANTHER HEAT SHOCK PROTEIN BINDING PROTEIN 3 156 - -
Lal1g1213 156 SUPERFAMILY Chaperone J-domain 45 145 IPR036869 -
Lal1g1213 156 SMART dnaj_3 48 105 IPR001623 -
Lal1g1213 156 PRINTS DnaJ domain signature 51 69 IPR001623 -
Lal1g1213 156 PRINTS DnaJ domain signature 69 84 IPR001623 -
Lal1g1213 156 PRINTS DnaJ domain signature 85 105 IPR001623 -
Lal1g1213 156 CDD DnaJ 49 99 IPR001623 -
Lal1g1213 156 ProSiteProfiles dnaJ domain profile. 49 118 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1213 Lal-Chr1 13380602 13383099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1213 - - gmx:100780336 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1213 1 13380602 13383099 Lal1g1213 1 13380602 13383099 ECH
Lal20g1260 20 17156051 17157827 Lal1g1213 1 13380602 13383099 LSH