Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1250 ATGAGTTCTCCTTCCAATGACAATGAGTTGGATACTATTAAGAGGCTTAAACATCTAGGAATGAAGCTTCTCAAATCCCTTTCTCATCAATTTCATAACCACCTTCTTCAAATCCTCAATGAACTGGCGCTGGTGTTATCAACTGTGGATCAAGCACCAACCGAGCCAATTCAAAAATCTCTTGTACCTTCAATGAAGGCATTGATTTCTGATGAGCTTTTGAAGCACACAGATGAGGATGTGAAGATTTCAGTTACATGTTGCATCACTGAGATTACAAGAATTGCAGCTCCAGAAGCCCCTTATGATGATGACCATATGAAGGAAATTTTCAAGCTTATAGTGGCATCTTTCGAGAAACTGTCTCATGTATCCGGCTGCTGCTATGAAAAAGTACTTACCATAATTGATAATGTTGCAAAAGTCAGATTATGCTTGGTCATGCTGGACCTTGAATGTGATGACCTGGTTATTGAGATGTTTCAGCATTTCTTGAAAAATATAAGGTCAAACCATCTCCGCCATGTAATTGATTGCATGGAAACCATTATGACCCTGGTCTTAGACGAAAGTGAAGAAATTTCTTCAGATCTTCTTAGACCTCTTTTAGATAGCGTAAGAAAGGAAAATCAGACCATTTCACCTATTTCTTGGACATTGGGGGAGAAAGTAATTACCAATTGTGCGGTTACGCTTAAGCCCTATCTCATGAAAGCAGTGGAGTCTTCAGGCCGAGCTCTTGATAAGTATGCACAAATAGTTGCTACTATTTGCCAAAATGGATCTGAATCCCCCCAACGTAATCATTCAAATGGTTCTAAGGACAAAGTGGAGACCAAGGGGCATGAACCAGATATTACTTGTGTGATAGATGCCCAGACTATGGATGATACTAAGCCAAACATTAGAAGTGTTGGTGTGAGTGCTTCTACTAAGGATGCTGAAGTTATCAAAAAGCCAATTTCAAAAAGGAAAAAGCATTTGGATCCTACCACGCACTCGGAAAGTATCAACAGAAAGACCAATGCAGAAAATGGCAATTTAGAGTCTGAGCAGGAGCCAAAATCAGAAACTCAGCAGAATACTGTACCGAGGAAGAGAGGCCGTAAGCCTAATTCTTTATTGCATGCGGAGGAAGGCTATGATAACTCTTGGATTTCTAAGGGAACAGAATCTGGAAAATCAACTCTTTCCAGAAAGGCTCGTGATAGCAGCTGTGCTTTTTCACCTTCTGAAAACCCTGCTTCTAGAAAGGAGTTGCAATTAAAGCCTAAAAATGCGAGTGAAGCCCTAGTTTCTGGGCCAAGAAATGAGAAAATTGTAAAACCTGCTCAGTCCAGAAAGACACAAGATATTGGCAATGTTGTTCCACTCGATGAAAGTCCTGCTTCCCACAAGGATAATGCGCTGTCACAGCCATTAGATATGAGCAAGGGTCGTAAAGCTTCAGTTTCTAAACCGAAGACTGGTGAGCATACTCATGTTGCATCCCCCTCGACAAATGATAGCATTCCTGATGGAAGCCGCTCCAAAAAGAGTCGATCAAGGAAAAGAAGTAGGACAGACAATGAAGATGATGACTCTAAATCTGTGTCAAAATTAAATGAATGCAATTTGAATCCTCTGCTCAAAGAGACCTCTTTGGAATCTACTGGTGTTAGGTTGGAAAAGGAGCCGGAAGCTAGGAAGGATGCTGAAGCTAAACCTCAGATATCCATCAGGAGAATCAAATTTCGTTGGAAGGATGAGAAAACTGCCATGGCTCCTGAAAGTGCAGTTACTGAGATTGAAACTAAGGCTTCTCGTGACAATAAGAGGAGGCTTAGTGCTACACCTGAAAAAGATGTCAATGAGTCATCTACTATTAAGGAGTTGAATACAAAGTCTGCAAATCCTCAAGCAAGGCGGAGGAGAAATCACACCACGGCATCTGAAACTCGTGATCATGGCGACTCATTGGTTGGTAGTAGAATTAAGGTCTGGTGGCCAATGGACAAAACGTTTTATGAAGGTGTTGTCGAATCTTATGATCCTGTCAAAGGAAAGCACAAGATTCTGTATGCTGATGGTGAGGTGGAAGTTTTAAACTTGAAAAAGCAGCGATGGGAGGTAATTGCCGTTGATGTTTCACCCGATGAGGAACAAGGATTTGCTCTTCACAAGCTTGCAGAGGCATCGGATATAGCACAAAAAATCAAAGAAGAACCTGATGTGGAATCGGACAAGGGTAACGATATCGATTTCAGGTCCAGGGGTAGAACTTCTGCCAGCATTTCCAAAAGTGGATATGCAAAATCTGCTGTTAAGTCTGTGGATACTTACGCCGATAAATCTATGGATGATCAACCTGGAACGGCTAGTGGGAAAGACACTGCTACGAAGCCTAGGTCCAAAAGAATGAAGACTGATTCAGATTCCGACAACAAAACGAACAAACCTAAAACTAATGGCATCGAAAATTAA 2463 0.4141 MSSPSNDNELDTIKRLKHLGMKLLKSLSHQFHNHLLQILNELALVLSTVDQAPTEPIQKSLVPSMKALISDELLKHTDEDVKISVTCCITEITRIAAPEAPYDDDHMKEIFKLIVASFEKLSHVSGCCYEKVLTIIDNVAKVRLCLVMLDLECDDLVIEMFQHFLKNIRSNHLRHVIDCMETIMTLVLDESEEISSDLLRPLLDSVRKENQTISPISWTLGEKVITNCAVTLKPYLMKAVESSGRALDKYAQIVATICQNGSESPQRNHSNGSKDKVETKGHEPDITCVIDAQTMDDTKPNIRSVGVSASTKDAEVIKKPISKRKKHLDPTTHSESINRKTNAENGNLESEQEPKSETQQNTVPRKRGRKPNSLLHAEEGYDNSWISKGTESGKSTLSRKARDSSCAFSPSENPASRKELQLKPKNASEALVSGPRNEKIVKPAQSRKTQDIGNVVPLDESPASHKDNALSQPLDMSKGRKASVSKPKTGEHTHVASPSTNDSIPDGSRSKKSRSRKRSRTDNEDDDSKSVSKLNECNLNPLLKETSLESTGVRLEKEPEARKDAEAKPQISIRRIKFRWKDEKTAMAPESAVTEIETKASRDNKRRLSATPEKDVNESSTIKELNTKSANPQARRRRNHTTASETRDHGDSLVGSRIKVWWPMDKTFYEGVVESYDPVKGKHKILYADGEVEVLNLKKQRWEVIAVDVSPDEEQGFALHKLAEASDIAQKIKEEPDVESDKGNDIDFRSRGRTSASISKSGYAKSAVKSVDTYADKSMDDQPGTASGKDTATKPRSKRMKTDSDSDNKTNKPKTNGIEN 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1250 820 MobiDBLite consensus disorder prediction 269 285 - -
Lal20g1250 820 MobiDBLite consensus disorder prediction 550 568 - -
Lal20g1250 820 SUPERFAMILY ARM repeat 22 260 IPR016024 -
Lal20g1250 820 MobiDBLite consensus disorder prediction 316 334 - -
Lal20g1250 820 MobiDBLite consensus disorder prediction 335 367 - -
Lal20g1250 820 MobiDBLite consensus disorder prediction 490 506 - -
Lal20g1250 820 MobiDBLite consensus disorder prediction 385 416 - -
Lal20g1250 820 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 7 811 IPR039776 GO:0007064
Lal20g1250 820 MobiDBLite consensus disorder prediction 533 547 - -
Lal20g1250 820 PANTHER TRANSCRIPTIONAL REGULATOR 7 811 - -
Lal20g1250 820 MobiDBLite consensus disorder prediction 750 766 - -
Lal20g1250 820 MobiDBLite consensus disorder prediction 730 749 - -
Lal20g1250 820 Gene3D - 645 699 - -
Lal20g1250 820 SUPERFAMILY Tudor/PWWP/MBT 652 692 - -
Lal20g1250 820 MobiDBLite consensus disorder prediction 596 621 - -
Lal20g1250 820 MobiDBLite consensus disorder prediction 792 814 - -
Lal20g1250 820 Pfam Sister chromatid cohesion protein PDS5 protein 34 236 - -
Lal20g1250 820 MobiDBLite consensus disorder prediction 589 651 - -
Lal20g1250 820 MobiDBLite consensus disorder prediction 517 532 - -
Lal20g1250 820 MobiDBLite consensus disorder prediction 730 820 - -
Lal20g1250 820 MobiDBLite consensus disorder prediction 261 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1250 Lal-Chr20 17024974 17032785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1250 - - lang:109347743 1372.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1250 20 17024974 17032785 Lal18g0042 18 301388 308507 LSH