Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1192 ATGTTCTATGGTACAGTGGTTTGGGACCCTTGGCTTATTGTTGGTCAAATTGTTTGTCTTCAATGCTTATACTACATCACTCTGGGAATGTTCTTATCATTACTTGTTGGAACTCGAGTTTCGCGAATGAGCCTTGTGTACTTCTTTGATTATGTTACCATCACTACCTCTACCATTACTGGTTGGTGTGTTATTGCTTCATTTCTGTTCAGCTCACTTGCAGGGGCTGTATATATGCTTTATTTGATTGAAAGAGCAAAGAAGTGCTTGGATTTTTCTGCCACTCTCTACATCATTCATCTTTTTATATGCATTGTGTTTGGGGGTTGGCCCTCTTCTATAACATGGTGGATTGTGCATGGTACTGGAATTGCAGTGATGGCTTTGCTAGGTGAGTATCTGTGCATCAAGCGTGAACTCCGGGAGATACCAATAACACGATATCGTTCAAGCGCTGTCCCACCGACTAGCCAAAGAAGCTCGGCCGAATCTGTTTGGCATTCAGTCTTGTCCAGTTTTCTTTCTCCTGCAAATCTCAAACCATGCCGAAGGGCTACAGACTCCATTTGCAGGATAGATGTTACCCCCAAGTAG 594 0.431 MFYGTVVWDPWLIVGQIVCLQCLYYITLGMFLSLLVGTRVSRMSLVYFFDYVTITTSTITGWCVIASFLFSSLAGAVYMLYLIERAKKCLDFSATLYIIHLFICIVFGGWPSSITWWIVHGTGIAVMALLGEYLCIKRELREIPITRYRSSAVPPTSQRSSAESVWHSVLSSFLSPANLKPCRRATDSICRIDVTPK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1192 197 Pfam Integral membrane protein S linking to the trans Golgi network 5 144 IPR019185 -
Lal20g1192 197 PANTHER PROTEIN SYS1 HOMOLOG 1 152 - -
Lal20g1192 197 PANTHER SYS1 1 152 IPR019185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1192 Lal-Chr20 16392884 16396423 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1192 K20318 - jre:108984884 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1192 20 16392884 16396423 Lal20g1192 20 16392884 16396423 ECH
Lal20g1192 20 16392884 16396423 Lal1g1275 1 14128117 14135940 LSH