Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1275 ATGTTTTATGGTGCGGTTACATGGGACCCTTGTCTTATTATTGGTCAAATTGTGTGTCTTCAATGCTTGTACTATATCACTTTGGGAATGTTCTTGTCTATACTTGTTGGAATTCGTGTGTCTCAAATGAGCCTTGTGTATTTCTTTGATTATGTTACCATCACTACCTCTACTGTTACTGGTTGGTGTGTTATTGCTTCATTTCTGCTCAGCTCAATTGCAGGGGCTGTATATATGCTTTATTTGATTGAAAGAGCAAAGAAGTGCTTGGATTTTTCAGCCACTCTCTACATCATCCATCTTTTTATATGCATTGTGTATGGGGGTTGGCCCTCTTCTATAACATGGTGGATTGTGCATGGTACTGGAATTGCATTTATGGCTTTGCTAGGCGAGTATCTGTGCATCAAGCGTGAACTCCGGGAGATACCAATAACCCGATATCGTTCAAGTAAGTTGAATTAG 465 0.3978 MFYGAVTWDPCLIIGQIVCLQCLYYITLGMFLSILVGIRVSQMSLVYFFDYVTITTSTVTGWCVIASFLLSSIAGAVYMLYLIERAKKCLDFSATLYIIHLFICIVYGGWPSSITWWIVHGTGIAFMALLGEYLCIKRELREIPITRYRSSKLN 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1275 154 PIRSF SYS1_homolog 1 154 IPR016973 GO:0000139
Lal1g1275 154 Pfam Integral membrane protein S linking to the trans Golgi network 5 144 IPR019185 -
Lal1g1275 154 PANTHER PROTEIN SYS1 HOMOLOG 1 153 - -
Lal1g1275 154 PANTHER SYS1 1 153 IPR019185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1275 Lal-Chr1 14128117 14135940 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1275 K20318 - tcc:18595890 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1275 1 14128117 14135940 Lal1g1275 1 14128117 14135940 ECH
Lal20g1192 20 16392884 16396423 Lal1g1275 1 14128117 14135940 LSH