Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1168 ATGTCTCACAGGACGGAGTTAGTAGCTGATGCCCTTCATGTTAGTTTGAATTCATATGTTACAGTTCATAGTGAAGCAGCCAGCTTTTTATGTCCGAGCCACAAGCAACCTTACCATTGTGCTGAGGCTCGCTCTCTTCTTAGCTTCTCGGTGACAAGCTCGTCAGTTTGGGTCAACTTGCCAGCTGCAGCTTCCTTAATTATCACTCTCCGCTATGTATCACTAGATTTTAAAATGAAGAGAAAAGCTGTGGCATATAACAATAAGGCAAGCTCGACCAGTGTTCAGTCTTCGAAGAAGCCTCCTGAAAACCCTAAAGTTGTTGCGAAGTTTGAATGGAGAGAAAAAGTGAATTCTCCTGTTGTTGAGGATGCAATTGATCACTTCACCAGACATCTAGTTTCTGAATGGGTGACAAACCTGTGGTACTCTCGCTTAACTCCTGACAAAGAGGGCCCCGAAGAGTTGGTTCAAATAATAAATGGTGTTGTTGGCGAAATTTCAGGACGCATGAGAAATATAAATTTGATTGATTTTTTGATAAGGGATCTTATTAATCTCATCTGCACACATTTGGAGCTTTTTCGTGCTGCTCACTCAAAGATTGAAAAACAACATAAAGGTTCATTAACAATTGAATGTCGAGATACAGAACTAAAACTTGTCTTGGCTGCTGAAAACAAATTGCACCCTGCTTTATTTTCTGCTGAAGCTGAGCATAAGGTTTTGCAGCATCTGATGAGTGGTCTTATGTCTGTCACTTTCAAATCTGAGGATTTGCAGTGCTCTTTCTTTCGATGTACTGCCAGGGAGCTTCTTGCATGTGCTGTAATAAGACCTGTCCTAAACCTAGCCAATCCAAGATTTATCAATGAAAGAATTGAATCTGTAGTAGTTAATAAGACCAAGGTTAATAAGGGGGCTGCTGCAGCTCCAGAGGCATCCAACACTAAAGTAGATGAGGTGCATATTCCGCCCGACCATTTTTCCGAGTGTTTAGATCCTGCTACTGGTGTTGAACTTGTGCAGCTAAGAAATGGTCCATCAAAAAATGCAAAAAAGTCATCTGCTGGAAATAATGCCAATGACAATTTTACTAAAGACCCATTACTTGCAATTGATGCCCGATCTTCCCGTTCATGGACATCATTGCCTGCAAACTCCCTTGCTAATGATGATCAAGTTATTCAACGACATCACTCAGGAGGAGAATGGGGAGATATCTTAGATGTCATCTCTCGCAGAAAGACCCAAGCCCTTGCTCCAGAACATTTTGAGAACATGTGGACAAAGGGAAAAAATTACAAGACAAAGGATGGCGGCAAACACTCAAATGAGCAATTCCCACCGCGTCCTGCCATAGGAAAATCGCTAATGGTAGATCATATGAAAGCTACTGGGCCCAAGGAAAAAGATAGATCTTCCAAGCTTAACCCCTCTATGGGAAGCCTCATCAATTCTGGACCCAGCAGTCGGTTTACCGTTAAAAATGCAGCCTTTCGTGCGGACAAGGATGGATCAAGTTCTCCTGTTACCTTATATAAAGATGATGAGCACAACGACATGGATACACAGATGGGCGAATCAGAGAACAGTACTTCTTGTACTTCTGAAGATGATGAAGCTAATACTGTCACTGGTCTTGATTCCCCTGTAACTAAGGTTTGGGATGGAAGAGCTAATAGGAAACAGTCTGTTACTTATGTTCATCACCCACTTGAAAATTTTGATAATCATGGTACAAAAAAGAGGCATAAGGGCCACCCTCGCTATCCGAGACTACCCAGAACCCAATCTGGCAGTAGAAGGTCTAGGCCAAGTGGTCATGACATACATACATGGCAGGAAGTTGAGAGAACAAGATTTTCATCTGGAGATGGTCAAGACATACTTAGTTCTTCAAGATCACATGTAAATTCTGAGGACTCTAGTGGTGATGATGATGATACTGAAAGTTCTGGCAGAATTTATAGTGGAGCAACAGCCTCTTCTTCTGTATCCTTTATATCTAAATCAGAATCTCATAGTTTGGCTGTTAATCCCCTGAAAAGTTCTTCAGTATTAGATTCTTTTTTCAGGTTGAAATGTGAGGTCTTAGGTGCAAGTATCGTGAAGAGTGGTTCAAGAACATTTGCTGTTTACTCCATATCTGTAACAGATGTAAACAATAACACCTGGTCAATTAAAAGAAGATTTCGTCATTTTGAGGAGCTACATCGACGCCTGAAAGAGTTCCCTGAGTATAATCTTCATTTGCCTCCAAAGCATTTTCTGTCAACAGGTTTAGATATTGCAGTCATCCAAGAGCGGTGTGGATTGCTGGATAGATATTTGAAGCAACTTATGCAGATGCCAGCAGTTTCAGAATCAATTGAAGTATGGGACTTTCTGAGTGTTGACTCCCAGACATACATATTCTCGAATTCATTTTCTATCATGGAAACATTATCAGTTGGCTTGGATGCTAAGCCATCTGAGAAGACTAAAATCAGTTCCAAATTTTATGCTCCTGCAACTGACAGTTTTGCCTCTCAAAGAGATAACTATAGCTCTGAAAGTAAAGAGGCTGTTTTGCAAACGAGAAATAATGTTGTGGCTGATGGATTAAGGTCTAAAGTAAATGATAAAGCATGGAAGAGTGCACCTGCTCCCAGTAACTTGGAGAAGACAGTGAAAGGAAGGGATAGTTTAGATGTGGTATCTGGTTTGTACCACGATACTTCTGATACTTTTCCAACAGAGTGGGTGTCACCAAATTTGAGTATACCAATACTGGATCTGGTTGATGTTATCTTCAATCTTCAAGATGGTGGGTGGATTAGGCGGCAGGCTTTTTGGGTTGCTAAACAAGTCTTACAATTAGGAATGGGCGATGCCTTTGATGATTGGTTAATAGAGAAAATCCAGCTCCTCCGTAAGGGGTCAGTGGTTGCTTCAGGGGTCGAGCGAGTTGAGCAAATACTCTGGCCTGATGGAATATTCTTAACAAAGCATCCAAATCGGCAACCACCACCACCACCTTCTAGTCCACCTCAGAGCTCACCGCAAAGCCATCAATCTACAGTATCTTCCCCAAGGATGGAAGATGTACAGCAGAGGGAGGCTGATCGGCGTGCGAAGTTTGTCTATGAGCTAATGATTGATCAAGCACCACCAGCAATTGTAGGTCTTGTTGGTAGAAAGGAGTATGAGCAGTGTGCTAGGGATCTATATTTTTTTCTTCAGTCATCTCTATGCTTGAAGCAGCTAGCTTTTGACCTCTTTGAGCTGCTGCTGTTATCAGCATTTCCAGAACTAGATCATGTATTCAAACAACTGCATGAAGAAAAGCACAAATTTGGTGAGTTTAGAACAAATTGA 3360 0.4158 MSHRTELVADALHVSLNSYVTVHSEAASFLCPSHKQPYHCAEARSLLSFSVTSSSVWVNLPAAASLIITLRYVSLDFKMKRKAVAYNNKASSTSVQSSKKPPENPKVVAKFEWREKVNSPVVEDAIDHFTRHLVSEWVTNLWYSRLTPDKEGPEELVQIINGVVGEISGRMRNINLIDFLIRDLINLICTHLELFRAAHSKIEKQHKGSLTIECRDTELKLVLAAENKLHPALFSAEAEHKVLQHLMSGLMSVTFKSEDLQCSFFRCTARELLACAVIRPVLNLANPRFINERIESVVVNKTKVNKGAAAAPEASNTKVDEVHIPPDHFSECLDPATGVELVQLRNGPSKNAKKSSAGNNANDNFTKDPLLAIDARSSRSWTSLPANSLANDDQVIQRHHSGGEWGDILDVISRRKTQALAPEHFENMWTKGKNYKTKDGGKHSNEQFPPRPAIGKSLMVDHMKATGPKEKDRSSKLNPSMGSLINSGPSSRFTVKNAAFRADKDGSSSPVTLYKDDEHNDMDTQMGESENSTSCTSEDDEANTVTGLDSPVTKVWDGRANRKQSVTYVHHPLENFDNHGTKKRHKGHPRYPRLPRTQSGSRRSRPSGHDIHTWQEVERTRFSSGDGQDILSSSRSHVNSEDSSGDDDDTESSGRIYSGATASSSVSFISKSESHSLAVNPLKSSSVLDSFFRLKCEVLGASIVKSGSRTFAVYSISVTDVNNNTWSIKRRFRHFEELHRRLKEFPEYNLHLPPKHFLSTGLDIAVIQERCGLLDRYLKQLMQMPAVSESIEVWDFLSVDSQTYIFSNSFSIMETLSVGLDAKPSEKTKISSKFYAPATDSFASQRDNYSSESKEAVLQTRNNVVADGLRSKVNDKAWKSAPAPSNLEKTVKGRDSLDVVSGLYHDTSDTFPTEWVSPNLSIPILDLVDVIFNLQDGGWIRRQAFWVAKQVLQLGMGDAFDDWLIEKIQLLRKGSVVASGVERVEQILWPDGIFLTKHPNRQPPPPPSSPPQSSPQSHQSTVSSPRMEDVQQREADRRAKFVYELMIDQAPPAIVGLVGRKEYEQCARDLYFFLQSSLCLKQLAFDLFELLLLSAFPELDHVFKQLHEEKHKFGEFRTN 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1168 1119 MobiDBLite consensus disorder prediction 1014 1028 - -
Lal20g1168 1119 Pfam Sorting nexin C terminal 939 1077 IPR013937 -
Lal20g1168 1119 ProSiteProfiles PXA domain profile. 119 298 IPR003114 -
Lal20g1168 1119 MobiDBLite consensus disorder prediction 467 656 - -
Lal20g1168 1119 MobiDBLite consensus disorder prediction 432 454 - -
Lal20g1168 1119 Gene3D - 692 808 IPR036871 GO:0035091
Lal20g1168 1119 MobiDBLite consensus disorder prediction 526 550 - -
Lal20g1168 1119 MobiDBLite consensus disorder prediction 603 623 - -
Lal20g1168 1119 SUPERFAMILY PX domain 694 801 IPR036871 GO:0035091
Lal20g1168 1119 MobiDBLite consensus disorder prediction 999 1013 - -
Lal20g1168 1119 PANTHER PX SERINE/THREONINE KINASE PXK 49 1116 - -
Lal20g1168 1119 SMART PX_2 696 800 IPR001683 GO:0035091
Lal20g1168 1119 CDD PX_SNX19_like_plant 694 798 - -
Lal20g1168 1119 Pfam PXA domain 119 296 IPR003114 -
Lal20g1168 1119 PANTHER PHOX (PX) DOMAIN-CONTAINING PROTEIN 49 1116 - -
Lal20g1168 1119 MobiDBLite consensus disorder prediction 510 525 - -
Lal20g1168 1119 ProSiteProfiles PX domain profile. 692 804 IPR001683 GO:0035091
Lal20g1168 1119 Pfam PX domain 723 800 IPR001683 GO:0035091
Lal20g1168 1119 MobiDBLite consensus disorder prediction 998 1030 - -
Lal20g1168 1119 MobiDBLite consensus disorder prediction 477 494 - -
Lal20g1168 1119 MobiDBLite consensus disorder prediction 624 639 - -
Lal20g1168 1119 SMART PXA_3 119 302 IPR003114 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1168 Lal-Chr20 16128904 16137103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1168 K17925 - gmx:100790491 1550.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1168 20 16128904 16137103 Lal20g1168 20 16128904 16137103 ECH
Lal20g1168 20 16128904 16137103 Lal1g1313 1 14768700 14782915 LSH