Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1313 ATGTCGAATCTGGTAACAGTGAAAGACCTTGTTGAAGAAGCCAAGAAACGCATTGTAATTCTTCTCGTATGCGTTGTTGGTCTCTCATATCTCATGTCATTGACAAGCTCGTCGGTTTGGGTCAACTTGCCTGCTGCAGCTTCCTTAATTATCATTCTCCGCTATTTATCACTAGATTTTGAAATGAAGAGAAAAGCTGCTGCATATAACAATAAAGCAAGCTCCACAAGTGTTCAGTCGTCGAAGAAGCCTCCTGAAAGCCCTAAAGTCGTTGCTAAGTTTGAGTGGAGAGCAAAAGTTAATTCTCCTGTTGTTGAGGATGCAATTGATCACTTCACTAGACATCTAGTTTCTGAGTGGGTGACAGACCTGTGGTACTCTCGCATAACTCCAGACAAAGAGGGCCCCGAGGAGTTGGTTCAAATAATAAATGGAGTTCTTGGGGAAATTTCAGGACGCATGCGAAATATAAATTTGATTGATTTTTTGATAAGGGATCTTATTAATCTCATTTGCACACACTTGGAGCTGTTTCGTGCTGCTCACTCAAAGGTTAAAAAACAACAGAAAGGTTCATTAACCATTGAAAGTCGAGATACGGAACTAAAACTTGTCTTGGCTGCTGAGAACAAATTGCATCCTGCTTTATTTTCTGCTGAAGCTGAGCATAAGGTTTTGCAGCATCTGGTGAATGGTCTTATGTCTGTCACTTTCAAGTCTGGCGATTTGCAGTGTTCTTTCTTTCGATATGCTGGCAGGGAGCTTCTTGCATGTGCTGTAATGAGACCTGTCCTAAACTTAGCCAATCCAAGATTTATTAATCAAAGGATTGAATCTGTAGTAGTTAATAAGAACAAAGTTAATAAGGGGGCTGCTGCATCTCCAAAGGCATCCGACAATAAAGTAGATGAGTCGCAGATTCCATCTGACCATTTTTCTGAGTGTTTAGATCCTTCTGCTAATGGTGTTGAACTTGTGATGCTAACAAATGATCAATCAAAAAATGCAAAAAAATCATCTGCACGAAATAATGCCAATGATAATTTTAATAAAGATCCATTACTTGCAATTGATGCTCGATCTTCCCGTTCATGGACATCATTGCCTGCAAACTCTCATGCTAATAATGACCAAGGTATTCAACAGCATCACTCAGGAGGAGAGTGGGGAGATATCTTAGATATCATCTCTCGCAGAAAGACCCAAGCCCTTGCCCCAGAGCATTTTGAGAATGTCTGGACGAAGGGTAAAAATTACAAGAAAAAGGATGGTGAGAACCAGTCAAATGAGCAAGTCCCACCACATCCTGTTGTAGGAAAACCACTAAAGGTAGATCATATGAAGGCGACTGGACCCAAGGAAAAAGACAGAACTCCCAAGCTTAATCCCTCTATGGGAAGCCACGTCAATTCTGGACACAGCAGTCAGTTCACCGTTGAAAATGTAGCCTTCCATGCAGACAAGAATGGATCAAGTTCTCTAGGTACCCTATATAAAGATGATGAGCACAACGACATGCATATGCGGATGGGTGAATCAGAGAGCAGTACTTCTTGTACTTCTGAAGATGATGAAACTACTACTGTCACTGGTCTTGATTCCCCTGAAACTAAGGTTTGGGATGGAAGAACTAATAGAAAACAGGCTGTTACTTACGTTCATCACCCACTTGAAAATTTTGATAGTCATGGGAGAAAAAAGAGGAATAAGAACCGCTCTCGCTATCCGATACTATCCAGAACCCAATCGGGGAGTAAAAGGTCTAGACCAAGTGGTCATGACATACATACGTGGCAGGAAGTTGAGAGGACAAGGTTTTTATCAGGAGATGGTCAAGACATACTTAGTTCTTCAAAATCACATGTAAATTCTGAGGACTCTAGTGATGATGATGATACTGGAAGTTTGGGTAGAATTTATAGTGGAGCAACAGCCTCTTCTTCCACGTCCTCTATTTCTAAATCAGAATCTCATAATTTGGCTGTTAATCCCCTGAAAAGTTCTTCAGTATTAGATTCTTTTTTCAAGTTGAAATGTGAGGTCTTAGGTGCAAGTATTGTGAAGAGTGGTTCAACAACATTTGCTGTTTACTCCATATCCGTTACAGATGTAAACAATAACACCTGGTCAATTAAAAGAAGGTTTCGTCATTTTGAGGAGCTACATCGACGCCTGAAAGAGTTCCCTGAATATAATCTTCATTTGCCTCCAAAACATTTTCTGTCAACAGGTTTAGATATCACAGTCATTCAAGAGCGGTGTGAATTGCTGGATAAATATTTGAAGCAACTTATGCAGATGCCAATAGTTTCAGAATCAATTGAAGTTTGGGACTTTCTGAGTGTTGACTCTCAGACATACATATTCTCAAATTCATTTTCTATCATGGAAACGTTATCAGTTGGCCTGGATGCTAAACCCTCTGAGAAGACTAAAATCGCTTCCAACTTTTCTGGACCTGCAAGTGACACTTCTGGCTCTCGAAGAGAAAACTATAGTTCTGAAAGTAAAGAGGCTGTTTTGCAAACAAGAAATAATGTTGCAGTTGATGGATTAAGGTCAAAAGTAAATGGCATGTCTCTTTCTCTACCAATAAAGAATGCACAGGAATCTAGAAAGTCATTGGATAGTTCTGGTGGTAATACAGATATTAGAGCTTCTCCCAGTAACTTGGAGAAGACAGTGAATGGAAGGGATAGTTTAGACAAGGTGTCTGATTTGCACCATGATACTTCTGATACTCTTCCAGCAGAGTGGGTACCACCAAATTTGAGTGTACCAATACTGGATCTGGTTGATGTTATCTTGAATCTTCAAGATGGTGGATGGATTAGGCGGCAGGCTTTTTGGGTTGCTAAACAAATCTTACAATTAGGAATGGGTGATGCCTTTGATGACTGGTTAATAGAGAAAATCCAGCGTCTCCGTAAGGGATCAGTGGTTGCTTCAGGGGTTGAGCGAGTTGAGCGAATACTCTGGCCTGATGGAATATTTTTAACCAAGCATCCAAATCGACGACCACCACCACCACCACCACCTTCTAGTCCATCTCAGAGCTCATCTCAAAGCCATCAATCCACAGAAGTATCTTCCTCAAAGATGGGTGATGAGCAGCAACAGGAGGCAGATCGGCGTGCGAAGCTTGTCTATGAGCTAATGATTGAGCGAGCACCATCAGCAATTGTAGGCCTTGTTGGTCGGAAGGAGTATGAGCAGTGTGCTAGGGATCTATATTTTTTCCTTCAGTCATCTGTTTGCTTGAAGCAGCTAGCTTTCAACCTTCTTGAGCTGCTGCTTTCGTCCGCGTTTCCAGAACTAGAAGATGTATTCAAGCAACTGCATGAAGAAAAGCACAAATTTGGTGAGTTCAAAACAAATTGA 3381 0.4105 MSNLVTVKDLVEEAKKRIVILLVCVVGLSYLMSLTSSSVWVNLPAAASLIIILRYLSLDFEMKRKAAAYNNKASSTSVQSSKKPPESPKVVAKFEWRAKVNSPVVEDAIDHFTRHLVSEWVTDLWYSRITPDKEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLINLICTHLELFRAAHSKVKKQQKGSLTIESRDTELKLVLAAENKLHPALFSAEAEHKVLQHLVNGLMSVTFKSGDLQCSFFRYAGRELLACAVMRPVLNLANPRFINQRIESVVVNKNKVNKGAAASPKASDNKVDESQIPSDHFSECLDPSANGVELVMLTNDQSKNAKKSSARNNANDNFNKDPLLAIDARSSRSWTSLPANSHANNDQGIQQHHSGGEWGDILDIISRRKTQALAPEHFENVWTKGKNYKKKDGENQSNEQVPPHPVVGKPLKVDHMKATGPKEKDRTPKLNPSMGSHVNSGHSSQFTVENVAFHADKNGSSSLGTLYKDDEHNDMHMRMGESESSTSCTSEDDETTTVTGLDSPETKVWDGRTNRKQAVTYVHHPLENFDSHGRKKRNKNRSRYPILSRTQSGSKRSRPSGHDIHTWQEVERTRFLSGDGQDILSSSKSHVNSEDSSDDDDTGSLGRIYSGATASSSTSSISKSESHNLAVNPLKSSSVLDSFFKLKCEVLGASIVKSGSTTFAVYSISVTDVNNNTWSIKRRFRHFEELHRRLKEFPEYNLHLPPKHFLSTGLDITVIQERCELLDKYLKQLMQMPIVSESIEVWDFLSVDSQTYIFSNSFSIMETLSVGLDAKPSEKTKIASNFSGPASDTSGSRRENYSSESKEAVLQTRNNVAVDGLRSKVNGMSLSLPIKNAQESRKSLDSSGGNTDIRASPSNLEKTVNGRDSLDKVSDLHHDTSDTLPAEWVPPNLSVPILDLVDVILNLQDGGWIRRQAFWVAKQILQLGMGDAFDDWLIEKIQRLRKGSVVASGVERVERILWPDGIFLTKHPNRRPPPPPPPSSPSQSSSQSHQSTEVSSSKMGDEQQQEADRRAKLVYELMIERAPSAIVGLVGRKEYEQCARDLYFFLQSSVCLKQLAFNLLELLLSSAFPELEDVFKQLHEEKHKFGEFKTN 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1313 1126 MobiDBLite consensus disorder prediction 288 311 - -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 870 895 - -
Lal1g1313 1126 SMART PXA_3 97 285 IPR003114 -
Lal1g1313 1126 Pfam PX domain 706 783 IPR001683 GO:0035091
Lal1g1313 1126 Pfam Sorting nexin C terminal 943 1084 IPR013937 -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 999 1040 - -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 1003 1017 - -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 587 607 - -
Lal1g1313 1126 ProSiteProfiles PX domain profile. 675 787 IPR001683 GO:0035091
Lal1g1313 1126 SUPERFAMILY PX domain 676 784 IPR036871 GO:0035091
Lal1g1313 1126 MobiDBLite consensus disorder prediction 812 829 - -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 1018 1036 - -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 366 383 - -
Lal1g1313 1126 ProSiteProfiles PXA domain profile. 102 285 IPR003114 -
Lal1g1313 1126 PANTHER PX SERINE/THREONINE KINASE PXK 4 1123 - -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 812 839 - -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 418 473 - -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 870 907 - -
Lal1g1313 1126 SMART PX_2 679 783 IPR001683 GO:0035091
Lal1g1313 1126 Pfam PXA domain 102 279 IPR003114 -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 446 461 - -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 511 534 - -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 510 658 - -
Lal1g1313 1126 CDD PX_SNX19_like_plant 677 781 - -
Lal1g1313 1126 Gene3D - 674 791 IPR036871 GO:0035091
Lal1g1313 1126 PANTHER PHOX (PX) DOMAIN-CONTAINING PROTEIN 4 1123 - -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 366 386 - -
Lal1g1313 1126 MobiDBLite consensus disorder prediction 639 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1313 Lal-Chr1 14768700 14782915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1313 K17925 - gmx:100790491 1630.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1313 1 14768700 14782915 Lal1g1313 1 14768700 14782915 ECH
Lal20g1168 20 16128904 16137103 Lal1g1313 1 14768700 14782915 LSH