Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1119 ATGGGTTCCTTCAAGTGGATCAATTGCTTCATCATTTTCAATTTCTTCTCATTCTCAATCTCCACCAATTTTCTAGATGAAGCTAAGAACCCTGATGTATTTGATTGGATGGTGAAAATAAGAAGGAAGATTCATGAGAATCCAGAATTGGGTTATGAGGAATTTGAAACAAGTAAAGTGATAAAAGCTGAATTGGATAAATTGGGAATCCCTTATAGACATGATCAAGTTGCATTAACTGCTGTTATTGCTTTCATTGGGACAAAAAAATCTCCTTTTGTTGCACTTAGAGCTGATATGGATGCTCTTGCTTTGCAGGAAAAGGTGGAGTGGGAGCACAAGAGTAAGGTACCTGGCAAGATGCATGCTTGTGGTCATGATGCACATGTAGCTATGCTACTTGGTGCTGCAAAGATACTCAAAGAGCATGAAAAAGAGATACAAGGAACAGTCGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGTGGAGGGGCAAAGAAAATTGTAGAATCCGGCGCCTTGGAAAATGTTAGTGCTATATTCGGATTGCATATCACACCGAGGTTTCCAATAGGTGAAGTAGCCTCTAGGCCTGGTCTCGTGTATGCAAGAAGTGGCTTCTTTGAAGCAACAATTAGTGGAAAGGGTGGTCATGCAGCTTTTCCACAACATTCTATTGACCCTATATTGGCAGCATGTAATGTGGTTATTAGCTTACAACACCTTATTTCTCGCGAGGCCGATCCTCTGGAATCCCAGGTTGTGTCAATAGGAAGCTTCCAAGGAGGTAGTGCATTCAACGTTATTCCAGATTCTGTCTCAATTGGTGGCACCTTCCGCGCCTTTTCGAAAGAAAGCTTCATGCTCCTAAGACAGCGCATTGAGCAGGTGCGTTGTAGGGAAGAATAA 909 0.4224 MGSFKWINCFIIFNFFSFSISTNFLDEAKNPDVFDWMVKIRRKIHENPELGYEEFETSKVIKAELDKLGIPYRHDQVALTAVIAFIGTKKSPFVALRADMDALALQEKVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKEHEKEIQGTVVLVFQPAEEGGGGAKKIVESGALENVSAIFGLHITPRFPIGEVASRPGLVYARSGFFEATISGKGGHAAFPQHSIDPILAACNVVISLQHLISREADPLESQVVSIGSFQGGSAFNVIPDSVSIGGTFRAFSKESFMLLRQRIEQVRCREE 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1119 302 TIGRFAM amidohydrolases: amidohydrolase 37 297 IPR017439 GO:0016787
Lal20g1119 302 Pfam Peptidase dimerisation domain 208 296 IPR011650 -
Lal20g1119 302 Gene3D Zn peptidases 37 202 - -
Lal20g1119 302 SUPERFAMILY Bacterial exopeptidase dimerisation domain 207 297 IPR036264 -
Lal20g1119 302 Pfam Peptidase family M20/M25/M40 95 207 IPR002933 GO:0016787
Lal20g1119 302 PANTHER PEPTIDASE M20 FAMILY MEMBER 15 297 IPR017439 GO:0016787
Lal20g1119 302 Gene3D - 203 297 - -
Lal20g1119 302 PANTHER AUXIN CONJUGATE HYDROLASE 15 297 - -
Lal20g1119 302 SUPERFAMILY Zn-dependent exopeptidases 32 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1119 Lal-Chr20 15421216 15433275 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1119 K21604 K14664 gmx:100789077 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1119 20 15421216 15433275 Lal20g1119 20 15421216 15433275 ECH
Lal10g1110 10 17930276 17933065 Lal20g1119 20 15421216 15433275 PCT
Lal20g1119 20 15421216 15433275 Lal10g1110 10 17930276 17933065 PCT