Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1076 ATGGCATCCAATATCCGTTTAGAACAGGTTCCATCTCAAAACCAATTGGCTATGAGAGGAGTAGCCCAACAGGGCTTGTGTCCTTCAATAAAAAATATTCTTCTTCTCGACTCTGAAGGGAAGCGTGTGGCAGTCCGGTATTATTCAGATGACTGGCCAACAAACAATTCGAAGTTAGCGTTTGAGAAGTTCGTGTTCGGTAAGACTGCCAAGACAAATGCTAGGGCCGAAGCTGACATAACATTACTGAAGAACAATATCATTATTTACAAATTTGTACAAGACCTGCATTTCTTTGTCACTGGTGGTGATGACGAAAATGAGCTCATTTTAGCTTCAGTTCTTCAGGGTTTCTTTGATGCAGTCACTCTTTTGTTGAGGAACAATGTTGATAAAAGAGAAGCACTTGAGAATTTGGATCTCATTCTCTTATGTCTTGATGAGATTGTTGATGGAGGGCTGATACTTGAAACAAATGGACCTCTTATTGCTGAAAAAGTTACCTCTCATAGTTTGGATGCTGATGCCCCCTTGTCTGAACAGACATTAACTCAAGCATGGGCTACAGCCAGAGAACATTTAACAAGAACCCTTTTGAAATGA 603 0.4046 MASNIRLEQVPSQNQLAMRGVAQQGLCPSIKNILLLDSEGKRVAVRYYSDDWPTNNSKLAFEKFVFGKTAKTNARAEADITLLKNNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRNNVDKREALENLDLILLCLDEIVDGGLILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1076 200 Pfam Clathrin adaptor complex small chain 30 169 IPR022775 -
Lal20g1076 200 Gene3D - 23 170 - -
Lal20g1076 200 PANTHER CLATHRIN ADAPTOR COMPLEX SMALL CHAIN 25 200 - -
Lal20g1076 200 PANTHER ZETA-COAT PROTEIN 25 200 IPR039652 GO:0006890|GO:0030126
Lal20g1076 200 SUPERFAMILY SNARE-like 30 171 IPR011012 -
Lal20g1076 200 CDD Zeta-COP 31 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1076 Lal-Chr20 14810151 14815230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1076 K20472 - gmx:547466 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1076 20 14810151 14815230 Lal1g1368 1 15539468 15543458 LSH