Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1368 ATGGAAACTAGTGACCCATATTCTCATTTTTCACAGATCTTCACTGTTCTCACTCCTCAGAACATGGCATCCTATGGCTTGTGTCCTTCAATAAAAAACATTCTTCTTCTTGACTCTGAAGGAAAGCGAGTGGCAGTCAAGTATTACTCGGATGACTGGCCGACAAACAATTCAAAGTTAGCTTTTGAGAAGTTTGTATTCACTAAGACTGCCAAGACGAATGCTCGGGCAGAAGCTGACATAACATTACTGGAGAACAACATCATAATTTACAAATTCATACAAGACCTGCATTTCTTTGTCACCGGTGGTGATGATGAAAATGAGCTCATTTTAGCATCAGTTCTTCAGGGTTTCTTTGATGCAGTCACCCTTCTGTTGAGGAATAATGTTGAGAAAAGAGAGGCACTTGAGAACTTGGATCTCATTCTCTTATGCCTTGATGAGATTGTTGATGGAGGGATGATACTGGAAACAAATGGACCTCTTATTGCTGAAAAAGTGACCTCACATAGCATGGATGCTGATGCTCCATTGTCTGAGCAGACACTAACTCAAGCATGGGCTACAGCCAGAGAACATTTGACAAGAACCCTTTTAAAATGA 606 0.4076 METSDPYSHFSQIFTVLTPQNMASYGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFTKTAKTNARAEADITLLENNIIIYKFIQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRNNVEKREALENLDLILLCLDEIVDGGMILETNGPLIAEKVTSHSMDADAPLSEQTLTQAWATAREHLTRTLLK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1368 201 Pfam Clathrin adaptor complex small chain 31 170 IPR022775 -
Lal1g1368 201 SUPERFAMILY SNARE-like 31 172 IPR011012 -
Lal1g1368 201 PANTHER CLATHRIN ADAPTOR COMPLEX SMALL CHAIN 27 201 - -
Lal1g1368 201 Gene3D - 26 171 - -
Lal1g1368 201 PANTHER ZETA-COAT PROTEIN 27 201 IPR039652 GO:0006890|GO:0030126
Lal1g1368 201 CDD Zeta-COP 32 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1368 Lal-Chr1 15539468 15543458 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1368 K20472 - gmx:547466 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1076 20 14810151 14815230 Lal1g1368 1 15539468 15543458 LSH