Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0367 ATGGCTACTCGCATCTTCTCTCGCCTCATCTCCAAATCCCGCTCCGCCACCTTCCTCCGCCCTCTCTCCTCCGCCACCCCCTCCTTCCGCCGCCTCCTCCTCCCTCCCTCCCCCACCCTCCGCTCATTCTCCACACGTGCCACGTCATCCTCCCTCAATGATCCAAACCCTAACTGGTCCAATCGTCCCCCGAAGGAGACCATTCTCCTCGATGGCTGCGATTTCGAGCACTGGCTCGTTGTTCTGGAGAAGCCCGAAGGAGATCCCACCAGAGATGAAATCATTGATAGCTATATTAAAACCCTTGCACAAGTTCTTGGAAGTGAAGAAGAGGCAAGAATGAAGATATATTCTGTTTCAACTAGACACTACTATGCATTTGGGGCACTTGTATCTGAAGAACTTTCATACAAAATAAAAGAGTTGCCCAAAGTTCGATGGGTCCTTCCTGATTCATATTTGAATGTTAAGGAAAAAGATTATGGAGGTGAGCCCTTTATAAATGGGCAAGCTGTTCCTTATGATCCCAAGTATCACGAAGAGTGGGTTAGAAACAATGCTAGAGCGAATGAAAGGAACAGACGCAATGACAGGCCTCGCAATGCTGACAGGTCAAGAAACTTCGATAGGAGGAGGGAAAATGTGGTTAGCAGAGATATGCAGAATCCTGGTGGTCCACCTCCAAGCAATGCAGGTCGGTTCCCCCCGAACAATACTGGCCCATATGCCCCTCCCAACAATGCGGGTGGATTTCCCCCCAATAACATGAGTGGCCCCCCTCCTAGCAGCGCCGGATATCCTCCTAACACTGCAGGTGGATATGCTCCTCAAAATGCAAGCAGATATGCTCCTCCCCACAATGCACCAGGTACTTACCCTCCACCACCACCTCCACCTCCTAATGGTGGCTATGGTCCCACCGGTGGTACGCCACAGAATAACTACACAGGCAACATAGGAGGGGTGCCACCAAACCAGAACATTGGAGGGGTTCCACCTAATGCAGGATGGTCAAATACAGCACCTAATAGAGATTATCAGCCACCAAACATGGGAGGCCCAACTGGTGGAAACCCATACAGTACAACATGA 1092 0.5064 MATRIFSRLISKSRSATFLRPLSSATPSFRRLLLPPSPTLRSFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVLEKPEGDPTRDEIIDSYIKTLAQVLGSEEEARMKIYSVSTRHYYAFGALVSEELSYKIKELPKVRWVLPDSYLNVKEKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNDRPRNADRSRNFDRRRENVVSRDMQNPGGPPPSNAGRFPPNNTGPYAPPNNAGGFPPNNMSGPPPSSAGYPPNTAGGYAPQNASRYAPPHNAPGTYPPPPPPPPNGGYGPTGGTPQNNYTGNIGGVPPNQNIGGVPPNAGWSNTAPNRDYQPPNMGGPTGGNPYSTT 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0367 363 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 13 351 IPR039206 GO:0016554
Lal20g0367 363 MobiDBLite consensus disorder prediction 331 346 - -
Lal20g0367 363 MobiDBLite consensus disorder prediction 189 217 - -
Lal20g0367 363 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 8, CHLOROPLASTIC/MITOCHONDRIAL-LIKE 13 351 - -
Lal20g0367 363 MobiDBLite consensus disorder prediction 40 63 - -
Lal20g0367 363 MobiDBLite consensus disorder prediction 306 323 - -
Lal20g0367 363 MobiDBLite consensus disorder prediction 189 363 - -
Lal20g0367 363 MobiDBLite consensus disorder prediction 287 305 - -
Lal20g0367 363 MobiDBLite consensus disorder prediction 228 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0367 Lal-Chr20 2947778 2951938 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0367 - - gmx:100802590 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0367 20 2947778 2951938 Lal20g0367 20 2947778 2951938 ECH
Lal20g0367 20 2947778 2951938 Lal1g1624 1 18655288 18658667 LSH