Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1624 ATGGCGACCCGAATCTTCTCTCGGGTCATTCCCAAATTCCTAACCCTAAATTCCATCTTACCCCGTTCCTCCACCGCCACCACCAACCTCTCCTTCCTCCGCCGCATCTCCTCCGCTTCCCCATCACTCCGCCTCAAAGTCATATTCCCCCATTCCCACCGCTCACTCTCCACACGCGCCACTTCATCCTCGCTCAACGATCCAAACCCTAATTGGTCCAATCGTCCACCGAAGGAGACCATTCTTCTCGATGGATGCGATTTTGAACACTGGCTTGTTGTTGTGGAGAAACCTGAAGGTGACCCAACTAGGGATGAAATCATTGATAGCTACATCAAAATCCTTGCACAAGTTGTTGGAAGTGAACAAGAAGCAAGGATGAAGATATATTCAGTTTCAACTAGACATTACTATGCATTTGGGGCACTTGTATCCGAAGAGCTTTCATACAAAATCAAAGAGTTGCCTAATGTTCGATGGGTCCTTCCTGATTCATATTTGAATGTCAAAGAAAAAGATTATGGAGGTGAGCCCTTTATAAATGGGCAAGCAGTTCCTTATGATCCCAAATATCATGAAGAGTGGGTTAGAAACAATGCCCGAGCTAATGAAAGGAACAGGCGCAATGACAGGCCTCGTAATGCTGACAGGTCAAGAAACTTTGATCGGAGGAGGGAAAATGTGGTGAGCAGAGATATGCAGAATCCCGGCGGTCCACCTCCAAGCAATGCAGGACGGTTCCCCCCCAATAATGCTGGTCCATATGCCCCTCTCAGTAATGCAGGTGCTGGATATGCCCCTCCCAACAATGCAGGTGCTGGATACGCCCCTCCTAACAATGCAGGTGCTGGATACGCCCCTCCCAACAGTGCAGGTGGTGGATACGCCCCACCCAACAGTGCAGGTAGTGGATACGCCCCTCCCAGTAACATGACTGGCCCCCCTCCCAGCGGTGGCCCAGGTAGATATCCTCCGAACAGTGCAGGTGGATTTGCTCCTCAAAATGCAGGCCGATCAGCACCTCCCCACATTGCACCCGGTAGCTACCCTCCACCTCCTCCGAGCAGTGGCTACGGTCCCGCAGGTGGCATGCCACAGAATAACTACACAGGGAACATTGGAGGGGTGTCACCAAACCAGAACATGGGAGGGGTTCCACCTAATGCAGGATGGTCAAATACAGCACCTAATAGAGATTATCAGCTACCAAGTATTGGAGGCCCAGCTGGTGGAAACCCATACTCTACCTGA 1251 0.51 MATRIFSRVIPKFLTLNSILPRSSTATTNLSFLRRISSASPSLRLKVIFPHSHRSLSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEKPEGDPTRDEIIDSYIKILAQVVGSEQEARMKIYSVSTRHYYAFGALVSEELSYKIKELPNVRWVLPDSYLNVKEKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNDRPRNADRSRNFDRRRENVVSRDMQNPGGPPPSNAGRFPPNNAGPYAPLSNAGAGYAPPNNAGAGYAPPNNAGAGYAPPNSAGGGYAPPNSAGSGYAPPSNMTGPPPSGGPGRYPPNSAGGFAPQNAGRSAPPHIAPGSYPPPPPSSGYGPAGGMPQNNYTGNIGGVSPNQNMGGVPPNAGWSNTAPNRDYQLPSIGGPAGGNPYST 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1624 416 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 1 408 IPR039206 GO:0016554
Lal1g1624 416 MobiDBLite consensus disorder prediction 296 416 - -
Lal1g1624 416 PANTHER COBALT ION BINDING PROTEIN-RELATED 1 408 - -
Lal1g1624 416 MobiDBLite consensus disorder prediction 202 255 - -
Lal1g1624 416 MobiDBLite consensus disorder prediction 344 359 - -
Lal1g1624 416 MobiDBLite consensus disorder prediction 202 230 - -
Lal1g1624 416 MobiDBLite consensus disorder prediction 361 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1624 Lal-Chr1 18655288 18658667 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1624 - - gmx:100802590 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1624 1 18655288 18658667 Lal1g1624 1 18655288 18658667 ECH
Lal20g0367 20 2947778 2951938 Lal1g1624 1 18655288 18658667 LSH