Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0352 ATGAAGCTGTCTTCAAAGTCCATTCTAAGCCCAAGTAGAAGCAGAGAAACCCCTCAGATTTCTCTCCAATCTTCCCTAAGCAGAAGGCTTAGGAACAATGGAAGCATGAAAGGAGGACAAGCTTCTCCAATGTTCCCAACTATAGGTGGAAAAAGAAGAGGGTGTGGTTTTGATAATCCAGAACCATCTTCTCCTAAAGTCACTTGTATTGGACAAGTGAGAGTGAAAACCAAGAAGCAAGGGAAGAAGATGAGGTCAAGATCAAAGAGAAGAGGTGGTGAAGTATTAAGCTTCAGGAAAAGTGGTGGTTCAGAACCAGATCTCATTAGACAAAACAGCCAAAGTTTTCAGTATCAATTGCAACAACAAGAGTGTTTGAAGCATAGGAACCAAAGATGGGTGCATCTTCCTTTGACTATTTGTGAAGCATTGAGAGAGTTTACTTGTTTTTTTCCTTGCAGGTCTTCTTGTGTATCAAAAGAAGAGAAAAATAGTGGTGATGGAGAAAGATCTAATAGTGCAGAAAAAAGTGGTCATGGAAATGTTAGAGAGGGTTCATGTGGTGCTGCATTTGCAAGGTGGTTGGTGGCTTTACATGAAGGAGATAGTAAAGGAAGGAGTATTGAACTTGGAATGAAGGAAGATGATTATGAAAATGGAAGAAGTGAGAGAAGTTATAGGCATGTGCTAGAAGATATTGATGTTGAAGTAATGGAAGAGAAGAATAAGAAGAAGTTTGAGGAGTTTGAAGAAGAGGAAGAAAAAGGAAGAGTTAGTATTTGTATTCCTCCAAAAAATGCTCTTTTGTTAATGAGGTGTAGATCTGATCCTGTTAAAATGGCTGCTTTGGCTAATAGGTTTTGGGAATCACCTTTTCATGAAGACCATGATGTTGTTGAAAAAGATGAAGTTGATGAGGATAATGAAGATGAAGTAGAAGTAGCAAAAGAGGAAGAAGAAGAAGAAGAAGGTGGTAAAAAAGAACACATTGAAAGTATAAGAAGTGGTTTTGTTAACAACAAAGAAATCCAATTAGAGGAACATGAAGTGAGGAAAAGTTGTGAAATTGAAAGCCAATTAGAGGAACATGAAGTGAGGAAAAGTTGTGAAATTGAAAGCGATGTTGTTCATCATGAACCAACACAGTACAAAGAAGTAGAATTAGAAGGAGAAGAGAAAAATGAAAGTGAACTAGGAAGTGTTGTTACCCATGAAGGTGAAAAATATTCAAGTGTTTTCATTTCTACCCTTCAAGTTAATCATGCTGATCTTGAAAAACCAGAAACTGAAGAAGAGGTTGAACAACCCAGTTTCAAGAATCTGAAGGAGGGTCAAGAAAATGAGCCAAGTTCAAAACTTTATCCCACCCCATCAACTTTCATAGCTTCAGAACTTCAAAATGGTGAAGCACAAGCAGAATCAGCAACAATGGCAGAACCAGAAGTACCAGCAACAATGGCAGAACCTGAAACTGAAGCTTCAACAGAAGGGTTAACAGAGGAACAAAAAGAGAACATTACAGTTGCTGCAGAAATATCACCTGAGCTTGAAGAAGAAGCCGACCCGACCCATAACGAACCGGGTTCGATTTCGGATCCGGGTCAAGAAAACGGGTCAGAGAAAGATGAAAGAGAAAGGTTACCAGAGTGCTTGTTACAGATGATGTGTGAACCAAAGGTGTCTATGGAAGTTTCAAAGGAGACATGGGTCTGCACCACCGACTTCGTGCGGTGGCTTCCGCCTGAGAAACTCGCCGGAAAACCTGACGACGGAGTTGTTGAGAGAACGGTGAGAATGAGGTCCAAGCCGAATAAGAAGCTTTCGCCGCAGCGGTTTCTTCAGCCGCCGAGGTACTCTTGTTCTTTTCCGGTGGTGCCGGCGGAGGGGATTCTCGCCGGAATGATAGAACAGAAGGTGGGGCCCAAAACAAATAACGGTTATAAGCCGTTTGTTCTCACGCGCTGCAAGTCGGAGCCGGTGAGGTTGTCGGCACGCGCCTGA 2001 0.4158 MKLSSKSILSPSRSRETPQISLQSSLSRRLRNNGSMKGGQASPMFPTIGGKRRGCGFDNPEPSSPKVTCIGQVRVKTKKQGKKMRSRSKRRGGEVLSFRKSGGSEPDLIRQNSQSFQYQLQQQECLKHRNQRWVHLPLTICEALREFTCFFPCRSSCVSKEEKNSGDGERSNSAEKSGHGNVREGSCGAAFARWLVALHEGDSKGRSIELGMKEDDYENGRSERSYRHVLEDIDVEVMEEKNKKKFEEFEEEEEKGRVSICIPPKNALLLMRCRSDPVKMAALANRFWESPFHEDHDVVEKDEVDEDNEDEVEVAKEEEEEEEGGKKEHIESIRSGFVNNKEIQLEEHEVRKSCEIESQLEEHEVRKSCEIESDVVHHEPTQYKEVELEGEEKNESELGSVVTHEGEKYSSVFISTLQVNHADLEKPETEEEVEQPSFKNLKEGQENEPSSKLYPTPSTFIASELQNGEAQAESATMAEPEVPATMAEPETEASTEGLTEEQKENITVAAEISPELEEEADPTHNEPGSISDPGQENGSEKDERERLPECLLQMMCEPKVSMEVSKETWVCTTDFVRWLPPEKLAGKPDDGVVERTVRMRSKPNKKLSPQRFLQPPRYSCSFPVVPAEGILAGMIEQKVGPKTNNGYKPFVLTRCKSEPVRLSARA 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0352 666 MobiDBLite consensus disorder prediction 1 40 - -
Lal20g0352 666 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 1 665 - -
Lal20g0352 666 MobiDBLite consensus disorder prediction 442 473 - -
Lal20g0352 666 MobiDBLite consensus disorder prediction 159 182 - -
Lal20g0352 666 Coils Coil 235 255 - -
Lal20g0352 666 MobiDBLite consensus disorder prediction 378 402 - -
Lal20g0352 666 MobiDBLite consensus disorder prediction 301 319 - -
Lal20g0352 666 MobiDBLite consensus disorder prediction 421 546 - -
Lal20g0352 666 PANTHER CHLOROPLAST PROTEIN HCF243 1 665 - -
Lal20g0352 666 MobiDBLite consensus disorder prediction 160 177 - -
Lal20g0352 666 MobiDBLite consensus disorder prediction 79 108 - -
Lal20g0352 666 MobiDBLite consensus disorder prediction 423 441 - -
Lal20g0352 666 MobiDBLite consensus disorder prediction 1 63 - -
Lal20g0352 666 Coils Coil 301 321 - -
Lal20g0352 666 MobiDBLite consensus disorder prediction 301 333 - -
Lal20g0352 666 MobiDBLite consensus disorder prediction 378 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0352 Lal-Chr20 2826599 2828599 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0352 - - aprc:113854429 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0352 20 2826599 2828599 Lal20g0352 20 2826599 2828599 ECH
Lal20g0352 20 2826599 2828599 Lal11g1449 11 17824167 17826110 LSH