Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1449 ATGAAGTTCTCTTCCAAGTCTATTTTAAGCCCAAGCAGAAGCAGAGAACCCCCTCAGATTTCTCTCCAATCTTCCCTTAGCAGGAAACTTAGGAACAATGGGAGCATAAAAGGAGGACAAGCTTCTCCAATGTTCCCAACAACAGGAGGGAAGAGAAGAGGGTGTGGTTTTGAGAATCCAGAACCATCTTCTCCTAAAGTCACTTGTATTGGACAAGTGAGGGTGAAGACCAAGAAACAAGGGAATAAGATGAGGTCAAGGTCAAATAGAAGAGGTGGTGAAGCATTAAGCTTTAGGAAAAGTGGAACAGAACCAGATCTCATTAGACAAAACAGCAAGAGTTTTCAGTATCAATTACAACAAGAGTGTTTGAAGCATAGGAACCAAAGATGGGTTCATCTCCCTTTGACTATTTGTGAAGCATTGAGAGAGTTCAGTTGCATTTTTCCTTGCAGGTCTTCTTGTGTATCAAAAGAAGAGAAAGGTGGTGGGGAAGTAGAAAGATCTAATCTTGAAGAAAATGTACATGGAAGTGTTAGAGAGGGTTCACAAGGGGATTCATTTGCAAAGTGGTTGGTTGCTTTGCAAGAAGGGGATGGTAAAGGAAGGGAGATTGAGCTTGTAATGAAGCAAAAGGAAGAAGATATTGATATTGATATTGAGGTAGTGGAAGAGAAGAATAAGAAGTATGAGGAAATTGGAGAAGAAGTGAAAGTGGAAGAGAAAGGAAGAGTTAGTATTTGTATTCCTCCAAAAAATGCTCTTTTGTTGATGAGGTGTAGATCTGATCCTCTCAAAATGGCTGCTTTGGCTAATAGGTTTTGGGAATCACCTATTCATGATTTTGATCCAAAAGATGAAGTAAGTGGTGAAAAAGAACACATTGAAATGGAGGAATATGATGATGATGAAGAAGAAAGGAATAGCATTTGTGGAAGTGAAATAGAAGGTGGTTTTGTGAACATTGAAGAAAAACATGTAATACAATTGGAAGAAACAGAAACATTAGAAGTGAAGGAAAGGTATGAAGTTGAAAGCAATAGTGACATTCATGAAGGTGAAATTTTTTCATGTGTTTCCAATTCTACCATTGAAGTTCATCCCCATGCAAGTCTTGACAAACCAGAATTCAAGAACGTGAAGGAGGAGCAAGAAAATGAGGAAAGTTCAGAACTTTATCCCACCCCATCAAAGTTTATAGCTCCAGAACTTCAAAACGATGAAGCAAAACCAGAATCAGAAGCTGAAGAAGAAGTTGCAGCAACAATGGCTGAACCTGAAAGTGAAACTATGACTGAAACTTCAATAGAGGAAGAAGAAAAGATTACAGCAGATATTTCATCTAAGGAACAAGAGGAAGAAACCGACCCGACCCATGTAGAATTCGACCCGGTTTCTGAACCGGGTCGACGAAACGGGTCAGAGAAATGTGGTGAGAGAGAAAGAGAAAGGTTACCAGAATGTTTGTTACTGATGATGTGTGAACCAAAGCTGTCTATGGAAGTTTCAAAGGAGACATGGGTATGCAGCACCGACTTCGTGCGGTGGCTACCGCCGGAGAGGATAGCCGTAAAACCCAATGAAGCCGGTGGTGTTGTTGAGAGAAGGGTCAGCATGGGGTGGAAGCCGAATAAGAAGCCTTCACCGCAGCGGTTTCTTCAGCCACCGAGATCTTCATGTTCGTTCCCAGCTATGCCGGCGGCGGCGGTGGAGGGTCTTGCCGGAATAATAGAGCAGAAGCTAGTGGGATCCAAATCTAGCATCAAAGGTTATGAGCCGTTTGTGCTCACGCGCTGCAAGTCAGAGCCGTTTGTGCTCACGCGCTGTAAGTCTGAGCCGGTGAGATCATCGGCTAAGCTCATCGCGGAGGCTTGTTTCTGGAATGATAGGAAGCTTGAGCCGGCTACTCTTGAAGTCGGCGCGCCAGCTGGGGTTGGATTTTGA 1944 0.4295 MKFSSKSILSPSRSREPPQISLQSSLSRKLRNNGSIKGGQASPMFPTTGGKRRGCGFENPEPSSPKVTCIGQVRVKTKKQGNKMRSRSNRRGGEALSFRKSGTEPDLIRQNSKSFQYQLQQECLKHRNQRWVHLPLTICEALREFSCIFPCRSSCVSKEEKGGGEVERSNLEENVHGSVREGSQGDSFAKWLVALQEGDGKGREIELVMKQKEEDIDIDIEVVEEKNKKYEEIGEEVKVEEKGRVSICIPPKNALLLMRCRSDPLKMAALANRFWESPIHDFDPKDEVSGEKEHIEMEEYDDDEEERNSICGSEIEGGFVNIEEKHVIQLEETETLEVKERYEVESNSDIHEGEIFSCVSNSTIEVHPHASLDKPEFKNVKEEQENEESSELYPTPSKFIAPELQNDEAKPESEAEEEVAATMAEPESETMTETSIEEEEKITADISSKEQEEETDPTHVEFDPVSEPGRRNGSEKCGERERERLPECLLLMMCEPKLSMEVSKETWVCSTDFVRWLPPERIAVKPNEAGGVVERRVSMGWKPNKKPSPQRFLQPPRSSCSFPAMPAAAVEGLAGIIEQKLVGSKSSIKGYEPFVLTRCKSEPFVLTRCKSEPVRSSAKLIAEACFWNDRKLEPATLEVGAPAGVGF 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1449 647 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 602 647 - -
Lal11g1449 647 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 1 390 - -
Lal11g1449 647 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 329 603 - -
Lal11g1449 647 PANTHER CHLOROPLAST PROTEIN HCF243 1 390 - -
Lal11g1449 647 PANTHER CHLOROPLAST PROTEIN HCF243 602 647 - -
Lal11g1449 647 PANTHER CHLOROPLAST PROTEIN HCF243 329 603 - -
Lal11g1449 647 Coils Coil 220 240 - -
Lal11g1449 647 MobiDBLite consensus disorder prediction 369 388 - -
Lal11g1449 647 MobiDBLite consensus disorder prediction 369 479 - -
Lal11g1449 647 MobiDBLite consensus disorder prediction 1 42 - -
Lal11g1449 647 MobiDBLite consensus disorder prediction 435 479 - -
Lal11g1449 647 MobiDBLite consensus disorder prediction 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1449 Lal-Chr11 17824167 17826110 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1449 - - aprc:113854429 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1449 11 17824167 17826110 Lal11g1449 11 17824167 17826110 ECH
Lal20g0352 20 2826599 2828599 Lal11g1449 11 17824167 17826110 LSH