Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0314 ATGCAACGTTCTTTGGCAATGAACTTACAAAGGCAAACACAAATGATGATGGCAAAGAGATTTAAGGAGCCATGTGATGTGTTCCTCAACCACAGATGCATGGACACAAAGAAAACCGTGGCTACTTTGCTTTACGACCATCTTTTCAGGCACGGGTTCAACCCTTTCTTGGATAACAAGAACATGAAGCCAGGGGACAAATTGTTTGATAAGATAAACGGTGCAGTTATGGAGTGCAAGATTGGTGTGGCTATTTTCTCACCACGTTATTGTGAGTCCTATTTTTGCCTTCATGAATTGGCTCTTCTTATGGGTTGTAGGAAGAAGATTATACCTATCTTTTGTGATGTTAAGCCATCTCAGTTAAGGGTTCTTAACAATAGAAAGTGGTCGGAGGAGGAACTCAGAAGGTTCAGATGGGCTCTTGAAGAGACTAAATCCACAGTGGGACTCACTTTCAATTCCTCAAAAGGGAACTTGTCTGAAATTGTGACAAGTGCTTCTGAAATCATTATTGGCAGCATGATTGAGCTTGAGAATGAAGAGCAGATGCAGAATTACAACTCACCAAATGCTCTTTAG 582 0.4107 MQRSLAMNLQRQTQMMMAKRFKEPCDVFLNHRCMDTKKTVATLLYDHLFRHGFNPFLDNKNMKPGDKLFDKINGAVMECKIGVAIFSPRYCESYFCLHELALLMGCRKKIIPIFCDVKPSQLRVLNNRKWSEEELRRFRWALEETKSTVGLTFNSSKGNLSEIVTSASEIIIGSMIELENEEQMQNYNSPNAL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0314 193 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 13 188 - -
Lal20g0314 193 Gene3D - 19 175 IPR035897 -
Lal20g0314 193 ProSiteProfiles TIR domain profile. 23 171 IPR000157 GO:0007165
Lal20g0314 193 SMART till_3 24 170 IPR000157 GO:0007165
Lal20g0314 193 SUPERFAMILY Toll/Interleukin receptor TIR domain 24 150 IPR035897 -
Lal20g0314 193 PANTHER COP1-INTERACTING PROTEIN-RELATED 13 188 - -
Lal20g0314 193 Pfam TIR domain 26 124 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0314 Lal-Chr20 2482680 2484119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0314 27 193 Miscellaneous Gene Families AT1G57670 29.474 1.27e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0314 - - ccaj:109788850 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0314 20 2482680 2484119 Lal20g0314 20 2482680 2484119 ECH
Lal20g0314 20 2482680 2484119 Lal11g1406 11 17477410 17478563 LSH