Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0282 ATGGGATCCCAATCACAGTCTCCTCTTCATGTTGTTGACTTCACTAATGAAAACATGAAGCCTGGCACTGATGCATGGTTTTCAGCCTGCAATATTGTGAGGACTGCACTTGAGGATCATGGTTGTTTCATCGCGCGCTACAACAGAGTAAGCAAAGAGCTTTGTGACTCTGTTGTCTGCGCGATGGAACAACTATTTGCTCTCCCATCCGAAACAAAAGTACGAAAGACTAGCGACAAGCTTTTCCGTGGCTACTTAGGACAAGTCACATGGCTTCCTTTGTATGAATCTTTGGGAGTCGATAATCCATTGAGTATAGATGGATGTCAAAAATTCGCACATATTATGTGGCCACAAGAAGGGAACGATCATTTCTGGAATTCGGCCGGAAGGCAGCGTGCAAAGAGTGAAAGCGTAAATGATTATGCTAAGGTGTTGGGAGAATTAGACCATATGGCCAAGAGAATGGTTTTTGAGAGCTATGGTGTGGACATGAAAAAATGTGACTCTTTCATAGCATCAAGCAATTATCTGCTTCGTTGTATGCAATATAGAACAGTGAAAATGGATGAGAATGAGTTAGGAATGCATTGTCACACAGACTTAAGCACCATATCCATAGTGCATCAGCTGAATAATCTGAATGGCTTGGAAATCAAAATTATGGAGGGGGAATGGTGTGGTGTTGATGCCTCACCCAACTTGTTTGTGGTCATGGCCGGTGATGCATTACAGGTGTGGAGTAATAGAAGGATACGTGCATGCGAACATAGGGTCATAATGAATGCAAAGAAGATTAGATACTCCATGGGACTATTTTCATTTATTGATAACATGGTGCATATACCAGAGGAGCTAGTTAATGAACAACATCCCTTGTGTTATAAACAAGTATTCAACCATGATGATTACATTCGTTTCTATGACATTCAGAAAATCAAAGAACATAATTCTCGAATTGAGGCCTATTGTGGAATCTGA 981 0.4108 MGSQSQSPLHVVDFTNENMKPGTDAWFSACNIVRTALEDHGCFIARYNRVSKELCDSVVCAMEQLFALPSETKVRKTSDKLFRGYLGQVTWLPLYESLGVDNPLSIDGCQKFAHIMWPQEGNDHFWNSAGRQRAKSESVNDYAKVLGELDHMAKRMVFESYGVDMKKCDSFIASSNYLLRCMQYRTVKMDENELGMHCHTDLSTISIVHQLNNLNGLEIKIMEGEWCGVDASPNLFVVMAGDALQVWSNRRIRACEHRVIMNAKKIRYSMGLFSFIDNMVHIPEELVNEQHPLCYKQVFNHDDYIRFYDIQKIKEHNSRIEAYCGI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0282 326 Gene3D - 1 312 IPR027443 -
Lal20g0282 326 Pfam 2OG-Fe(II) oxygenase superfamily 184 274 IPR044861 -
Lal20g0282 326 SUPERFAMILY Clavaminate synthase-like 8 310 - -
Lal20g0282 326 Pfam non-haem dioxygenase in morphine synthesis N-terminal 25 86 IPR026992 -
Lal20g0282 326 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 174 278 IPR005123 -
Lal20g0282 326 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 325 - -
Lal20g0282 326 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0282 Lal-Chr20 2099146 2101005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0282 141 298 Glycosyltransferase AT5G59530 28.834 3.96e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0282 - - gmx:100775440 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1527 13 15010982 15013857 Lal20g0282 20 2099146 2101005 PCT