Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1527 ATATTGAACCTCATAATGGGATCCCAAATACCCTCTCATCTTCCTATTGTTGACTTTATCGATGAAAATATGAAGCCTGCTACAGATTCATGGCTTTCAACCTGCCATGTGGTTCGAACAGCACTTGAGGATCATGGTTGTTTTGTGGTACGCTACAATAAAGTTAGCCCAGAGCTTTGCAGAACTATTGTCTCTGAAATGAAACAACTATTTGGTCTACCATTAGAGACAAAGAAGCAAGAAACTAGTGACAAGCTTTTCCATGGTTACTACGGACAAATCCCATCACTTCCCTTATATGAATCATTTGGTATTGATGATCCATTGACTTTTCATGGAACTCACAAGTTCACACACATAATGTGGCCACAAGGAAATGATCATTTCCGTGAAAGTATCAATAAGTATGCAAAGATGTTGGCAGAAATAGACCAAGTGGTGAAGAGAATGGTGTTTGAGAGTTATGGGGTGGACCAAACAAAATGCAATTCTATGATTGAATCAGGAAATTATCTACTTCGGTGCCTCCAATACAGACCACACTTAATAGATGAGAGTGATTTGGGAATGCAACCTCACACTGATTTGACTATGCAATCAATATTGCATCAGGTCAATAACATACATGGCTTGGAAGTTAAACTTAAAGATGGACAGTGGATTGTGGTTGATCCCTCACCCTCCTTGTTTCTGGTCCTCGCTGGAGATGGATTCAAGGTTTGGAGTAATGGTAGGATAAAGGCATGTGAACACCGAGTTATAATGAATGCAAAGAATATGAGATACTCTATGGGACTATTTTCTTTCAATGGTAAGACACTGCAGATACCAGAGGAGGTTGTTGATGAACAACATCCATTGCTTTATAAACCATTCGATCATTTTGAATACCTTCGTTTCTTTGATAAAGAGAAAATCAGAGAGTCTGATTTGCGAGTTAAAACATATTGTGGATTATAA 960 0.3844 ILNLIMGSQIPSHLPIVDFIDENMKPATDSWLSTCHVVRTALEDHGCFVVRYNKVSPELCRTIVSEMKQLFGLPLETKKQETSDKLFHGYYGQIPSLPLYESFGIDDPLTFHGTHKFTHIMWPQGNDHFRESINKYAKMLAEIDQVVKRMVFESYGVDQTKCNSMIESGNYLLRCLQYRPHLIDESDLGMQPHTDLTMQSILHQVNNIHGLEVKLKDGQWIVVDPSPSLFLVLAGDGFKVWSNGRIKACEHRVIMNAKNMRYSMGLFSFNGKTLQIPEEVVDEQHPLLYKPFDHFEYLRFFDKEKIRESDLRVKTYCGL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1527 319 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 12 318 - -
Lal13g1527 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 14 91 IPR026992 -
Lal13g1527 319 SUPERFAMILY Clavaminate synthase-like 12 305 - -
Lal13g1527 319 Gene3D - 12 317 IPR027443 -
Lal13g1527 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 168 271 IPR005123 -
Lal13g1527 319 Pfam 2OG-Fe(II) oxygenase superfamily 175 269 IPR044861 -
Lal13g1527 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1527 Lal-Chr13 15010982 15013857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1527 130 297 Glycosyltransferase AT5G59530 27.168 5.22e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1527 - - gmx:100775440 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1527 13 15010982 15013857 Lal20g0282 20 2099146 2101005 PCT