Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0274 ATGGTAGGAAGCATTATGGAAATGGTAAATACATATTCCAATGGAATTGTTCACAATGGTAATGGATTAGAGGAGAAGGTTGATGAGCTAAGAGCACTAGTTGGAAAAAGTGGTGGTGATCCTTTGAGAATTGTGAGTGTTGGAGCTGGTGCATGGGGAAGTGTTTTTGCAGCAACATTGCAAGATACTTATGGCCAATTCCGGGACAAGATACAAATCCGGATATGGAGGAGAGCAGGAAGAGCAGTTGATAGAGGCACTGCTGAACATCTCTTTGAGGTTATCAATTCAAGGGAAGATGTGTTGAGGAGGTTGATTCGGCGTTGCGCTTATTTGAAATATGTTGAAGCAAGGCTCGGTGATAGGACCCTTTTTGCTGATGAGATTCTGAAAGATGGATTTTGCTTCAACATGATTGATACTCCACTTTGTCCATTAAAGGTTGTGACTAACTTGCAGGAAGCTGTTTGGGATGCTGATATTGTTGTCAATGGTTTGCCTTCGACCGAAACTCGGGAGATCTTCGAAGAGATTAGTAAGTTTTGGAATGAGAGGATCACAGTGCCTATAATAATCTCTTTGGCAAAGGGGATTGAGGCTGCATTGGAGCCTGTTCCCCATATTATAACTCCCACAAAAATGATTAATCAAGCAACTGGAGTGCCTATGGAGAACATTTTGTATCTTGGCGGTCCAAATATTGCTTCGGAAATTTACAACAAGGAGTATGCCAATGCTAGAATATGTGGAGCCGAGAAATGGAGGAAACCTCTGGCGAAGTTTCTAAGACAACCACAGTTTGCTGTCTGGGACAACAGTGATCTTGTCACACATGAGGTCATGGGTGGCTTGAAAAATGTCTATGCAATTGGAGCTGGAATGGTAGCAGCCCTTACAAATGAGAGTGCTACCAGCAAATCTGTGTACTTTGCACACTGTACGTCGGAGATGATATTTATCACTCACTTGCTGGCTGAAAAACCTGAGAAACTTGCAGGGCCATTATTAGCCGATACTTACGTGACCTTGTTAAAAGGTCGTAATGCATGGTATGGCCAGATGCTAGCTAAGGGACAACTAAGCCCCGACATGGGTGATAGCATTAGTGGCAAAGGGATGATTCAGGGAGTGTCTGCAGTCAAGGCATTTTTCGAACTTTTGAGCCAATCGAGCCTGAACGTGTTGCATCCGGAAGAAAACAAACCTGTTGCTCCTGTTGAGCTCTGTCCTATCTTGAAGACACTATACAAAATATTGATATCCAGGGAACAATCATCACAAGCTATTCTAAAAGCTCTGAGGGATGAAAATCTGAATGATCCTCGCGAGCGCATTGAAATAGCACAAAGCCATGCTTTTTACAAGCCTTCACTTCTTGGACAACCATGA 1389 0.4312 MVGSIMEMVNTYSNGIVHNGNGLEEKVDELRALVGKSGGDPLRIVSVGAGAWGSVFAATLQDTYGQFRDKIQIRIWRRAGRAVDRGTAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCFNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKFWNERITVPIIISLAKGIEAALEPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPQFAVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEKPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLSPDMGDSISGKGMIQGVSAVKAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSSQAILKALRDENLNDPRERIEIAQSHAFYKPSLLGQP 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0274 462 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 146 248 IPR011128 GO:0016616|GO:0046168|GO:0051287
Lal20g0274 462 Gene3D - 140 270 - -
Lal20g0274 462 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 274 429 IPR008927 -
Lal20g0274 462 Gene3D - 24 105 - -
Lal20g0274 462 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 1 462 - -
Lal20g0274 462 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 274 428 IPR006109 GO:0004367|GO:0005975
Lal20g0274 462 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 46 63 IPR006168 GO:0004367|GO:0006072|GO:0009331
Lal20g0274 462 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 267 291 IPR006168 GO:0004367|GO:0006072|GO:0009331
Lal20g0274 462 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 274 IPR036291 -
Lal20g0274 462 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 1 462 - -
Lal20g0274 462 Gene3D - 274 434 IPR013328 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0274 Lal-Chr20 2014776 2018082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0274 1 462 Acyl Lipid Metabolism Gene Families AT2G41540 87.041 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0274 K00006 - gmx:100810871 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0274 20 2014776 2018082 Lal20g0274 20 2014776 2018082 ECH
Lal11g1357 11 17117094 17122310 Lal20g0274 20 2014776 2018082 LSH