Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1357 ATGGGAATAGTAGATGCATATTCAAATGGGTCTCTTCATAATTATAATGGAGTAGAGGAGAAGCTTGATGAGCTTAGGGCACTTATTGGAAAAGGTGATAATGATCCATTGATAATTGTGAGTGTTGGAGCTGGTGCTTGGGGAAGTGTTTTTGCAGCAATTTTGCAAGATATATATGGCCAGTTCAGGGACAAGATACAAATCAGGATATGGAGAAGAGCAGGAAGGAGTGTTGATAGAGACACTGCTGAACATCTCTTTGAAGTTATCAATTCAAGGGAGGATGTGTTGAGGAGGTTGATTCGGCGTTGCGCTTATTTGAAGTATGTTGAAGCAAGGCTTGGTGATAGGACCCTCTTTGCTGATGAGATTCTGAAAGATGGATTTTGTTTGAATATGATTAATACTCCACTTTGTCCATTGAAGGTTGTGACTAACTTGCAGGAAGCTGTTTGGGATGCTGATATTGTGGTCAATGGTTTGCCTTCGACCGAAACGCGCGAAATCTTTGAAGAAATCAGTAAGTTTTGGAATGAGAGGATCACAGTGCCTATAATAATATCTTTAGCTAAGGGTATAGAGGCTGCATTGGATCCTGTTCCACACATTATAACTCCCACAAAAATGATTAACCAAGCAACTGGAGTGCCTATGGAGAACATTCTGTATCTTGGAGGTCCAAATATTGCCTCAGAAATTTACAACAAGGAGTATGCCAATGCTAGAATATGCGGAGCTGAGAAATGGAGGAAACCTCTGGCGAAGTTTCTACGACAACCGCAGTTTACTGTCTGGGACAACAGTGATCTTGTCACACATGAGGTCATGGGAGGCTTGAAAAATGTCTATGCAATTGGAGCTGGAATGGTAGCAGCCCTTACCAATGAGAGTGCTACCAGCAAATCTGTATACTTTGCACATTGTACATCAGAGATGATATTTATCACTCACTTGTTGGCCGAAAAACCTGAAAAACTAGCAGGGCCATTGTTGGCTGATACTTATGTGACCTTGTTAAAAGGTCGTAATGCATGGTATGGCCAGATGCTAGCTAAGGGACAATTAAGCCCTGACATGGGTGACAACATTAGTGGCAAAGGGATGATTCAGGGCGTGTCTGCAGTGGAGGCATTCTTTAAACTTCTGAGCCAATCGAGCTTGAATGTGTTGCATCCCGAAGAAAATAAACTTGTTGCTCCTGTTGAACTTTGCCCTATCTTGAAGACACTGTACAAAATATTGATATCCAGGGAACAGTCATCACAAGCTATTCTAAAAGCTCTGAGGGATGAAAATCTGAACGACCCTCGTGAGCGCATTGAAATTGCACAAAGTCATGCTTTTTACAAGCCTTCGCTTCTTGGACAACCGTGA 1374 0.4207 MGIVDAYSNGSLHNYNGVEEKLDELRALIGKGDNDPLIIVSVGAGAWGSVFAAILQDIYGQFRDKIQIRIWRRAGRSVDRDTAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMINTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKFWNERITVPIIISLAKGIEAALDPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPQFTVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEKPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLSPDMGDNISGKGMIQGVSAVEAFFKLLSQSSLNVLHPEENKLVAPVELCPILKTLYKILISREQSSQAILKALRDENLNDPRERIEIAQSHAFYKPSLLGQP 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1357 457 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 41 58 IPR006168 GO:0004367|GO:0006072|GO:0009331
Lal11g1357 457 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 262 286 IPR006168 GO:0004367|GO:0006072|GO:0009331
Lal11g1357 457 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 269 423 IPR006109 GO:0004367|GO:0005975
Lal11g1357 457 Gene3D - 274 429 IPR013328 GO:0016491
Lal11g1357 457 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 8 457 - -
Lal11g1357 457 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 269 IPR036291 -
Lal11g1357 457 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 141 243 IPR011128 GO:0016616|GO:0046168|GO:0051287
Lal11g1357 457 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 8 457 - -
Lal11g1357 457 Gene3D - 38 273 - -
Lal11g1357 457 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 269 424 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1357 Lal-Chr11 17117094 17122310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1357 8 457 Acyl Lipid Metabolism Gene Families AT2G41540 86.475 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1357 K00006 - gmx:100810871 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1357 11 17117094 17122310 Lal11g1357 11 17117094 17122310 ECH
Lal11g1357 11 17117094 17122310 Lal20g0274 20 2014776 2018082 LSH