Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0247 ATGGCTGTTGCAGCAGCAACTATCGTTGTGCCATTGAGCTTGCTCTTCTTCGCTTCAGGTCTCGTTGTTAATCTCATTCAGACAGTAGGCTATGTCCTTGTACGGCCATTGTCAAAGAATTTATACAGACGGATCAACCGGACAGTGGCAGAACTATTATGGCTGGAGCTCGTATGGATTATTGATTGGTGGGCAGGAGTTAAGGTCCAAGTATTCACAGATCGTGAAACGCTTCGTTTGATGGGTAAAGAGCATGCACTTGTCATATGCAATCACAGAAGTGATATTGATTGGCTCGTTGGGTGGGTTTTAGCTCAGCGTTCAGGTTGCCTTGGCAGCAGTCTTGCTGTGATGAAGAAATCATCAAAGTTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCTGAGTACCTTTTTCTTGAGAGAAGTTGGGCTAAGGATGAAAAAACATTGAAGTCAGGCATCCAGCGACTGAGTGATTACCCTCTTCCCTTTTGGTTGGCTCTATTTGTAGAAGGAACACGCTTTACACAGGCCAAACTTTTAGCTGCTCAAGAATATGCAACCTCCACCGGATTGCCTATTCCTAGAAACACTTTGATTCCTAGAACTAAGGGTTTTGTTGCTGCAGTAAGTCAAATGCGCTCATTTGTTCCTGCCGTTTATGATATGACAGTGTCCATCCCCAGGAGTTCACCTGCTCCTACTATGCTGAGACTCTTTAAGGGGCAATCTTCAGTGGTGCATGTTCATATCAAGCGGCATTTGATGAAGGAATTGCCCGAAACGGATGAATCTGTTGCTCAATGGTGTCGTGATATATTTGTGGCCAAGGATGCATTGTTGGACAAACATATAGCTGAGGATACTTTCAGTGATCAAGAGTTGCAGGATAGTGGTCGACCGATAAAGTCTCTTGTGGTTGTCATATCTTGGGCTTGTCTTGTTATTGCTGGGTTTATAAAGTTCCTCCAATGGTCTTCACTACTATCATCATGGAAGGGTGTTGCATTTTCATCATTTGGTTTGGCAATTGTTACTGCTCTCATGCAAATCTTGATTCGATTTTCGCAGTCGGAGCGGTCAACCCCGGCCAAGGTTGTCCCTGCAAAGAAAGAGTGA 1122 0.4456 MAVAAATIVVPLSLLFFASGLVVNLIQTVGYVLVRPLSKNLYRRINRTVAELLWLELVWIIDWWAGVKVQVFTDRETLRLMGKEHALVICNHRSDIDWLVGWVLAQRSGCLGSSLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDEKTLKSGIQRLSDYPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPIPRNTLIPRTKGFVAAVSQMRSFVPAVYDMTVSIPRSSPAPTMLRLFKGQSSVVHVHIKRHLMKELPETDESVAQWCRDIFVAKDALLDKHIAEDTFSDQELQDSGRPIKSLVVVISWACLVIAGFIKFLQWSSLLSSWKGVAFSSFGLAIVTALMQILIRFSQSERSTPAKVVPAKKE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0247 373 CDD LPLAT_LCLAT1-like 58 253 - -
Lal20g0247 373 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 371 - -
Lal20g0247 373 Pfam Acyltransferase 78 228 IPR002123 GO:0016746
Lal20g0247 373 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Lal20g0247 373 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 371 - -
Lal20g0247 373 SMART plsc_2 86 208 IPR002123 GO:0016746
Lal20g0247 373 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 64 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0247 Lal-Chr20 1753709 1761412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0247 3 371 Miscellaneous Gene Families AT3G57650 78.320 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0247 K13523 - gmx:100812696 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0247 20 1753709 1761412 Lal20g0247 20 1753709 1761412 ECH
Lal11g1322 11 16836908 16846873 Lal20g0247 20 1753709 1761412 LSH