Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1322 ATGGCTGTTGCAGCAGCAGCTGTCGTGGTTCCATTGGGTTTGTTCTTCTTTGCTTCAGGTCTCGTTGTTAACCTCATTCAGGCAATATGCTATGTCCTTGTACGCCCACTGTCAAAGAATTTTTACAGACGGATCAACCGGGTAGTAGCAGAATTGTTGTGGCTGGAACTCGTATGGATTATTGATTGGTGGGCAGGACTTAAGTTAGAAGCTTCTGGACTAGTGGCAGTTACGTTTAAAGCTTTCATGGCTGACACTACTGATCCTCCTCCTTCCATGGATTCACCACCAAATTTCTCTTCTGCTGCACCTGTTCAAGCACTCTCTCCATCTATTTCTCTTCCTGTTCCAATTGCAAAGCTCACTGAGAAGAATTATCTCATGTGGAGCCAATTTATGCTTGCTGTTCTCAAAGCAAATCGAGTTATTAGGTTTGTGTTAAATCCTCAATTTCCTCCTCAATTTCTCAATGAATCAGCTCGTCTACATCATAATGTCAATCCTGCACTCCTAATCTGGGAAGAACAGGATCAGACAGTGTATTCTTGGCTATTAAACTCAATTTCAAAATCTCTACATCCTCGTGTTATAGGATGCACTTCACCATTTCAGCTTTGGCACGAAATTCACTCTTTTTGCAATGCTCACACCAAGGCAAGAAGTTGCCAACTTAGGTCACAGCTTACACCTTCATTCTCTCTGTATTTCTCTCTCTCTCTCTCTCCCTTTTTGCAATCTTTACAAATGTTAAAATTAACGTTTGACTTGAATATTATGGACTTCCAGCTGATTAAAGCCACTCTAGCTGGTAAAGAGCATGCACTTGTCATATGCAATCACAAAAGTGATATTGATTGGCTCGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTCGGCAGCACTCTCGCTGTGATGAAGAAATCATCAAAGCTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCAGAGTATCTTTTTCTGGAGAGAAGTTGGGTTAAAGATGAAAACACATTAAAGTCAGGCCTCCAGCGACTGAGTGATTACCCTCTTCCCTTTTGGCTGGCTCTCTTCGTAGAAGGAACACGCTTTACACAGGCTAAACTATTAGCGGCTCAGGAATATGCAGCCTCCACCGGGTTGCCAGTTCCTAGGAACACTTTGATTCCTAGAACTAAGGGGTTTGTTGCATCAGTAAGTCATATGCGCTCATTTGTTCCTGCCATTTATGATATGACAGTGGCCATCCCTAAGAGTTCACCTGCTCCTACTTTGCTGAGACTCTTCAAGGGGCAACCTTCAGTGGTGCATGTTCATATCAAGCGGCATTTGATGAAGGAATTGCCTGAAACAGATGACTCTGTTGCTCAATGGTGTCGTGATATATTCGTGGCCAAGGATGCCTTGTTGGACAAACATATAGCTGAGGATACTTTCAGTGATCAAGAATTTCAAGATATTGGTAGACCAATAAAGTCTCTTGTGGTGGTCATATCTTGGGCTTGTCTTGTCATTGCTGGGTTTATAAAGTTCCTCCAATGGTCTTCACTACTTTCATCATGGAAGGGTGTTGCATTTTCATCTTTTGGTTTGGCCATTGTTACTGCTCTCATGCACATCTTGATTAGGTTCTCACAATCAGAGCGTTCAACCCCAGCTAAGGTTGTCCCTGCAAAGAAACAGAGTGAACAATTGGAGGCAAGTAATGACAAACAACATTAG 1722 0.4292 MAVAAAAVVVPLGLFFFASGLVVNLIQAICYVLVRPLSKNFYRRINRVVAELLWLELVWIIDWWAGLKLEASGLVAVTFKAFMADTTDPPPSMDSPPNFSSAAPVQALSPSISLPVPIAKLTEKNYLMWSQFMLAVLKANRVIRFVLNPQFPPQFLNESARLHHNVNPALLIWEEQDQTVYSWLLNSISKSLHPRVIGCTSPFQLWHEIHSFCNAHTKARSCQLRSQLTPSFSLYFSLSLSPFLQSLQMLKLTFDLNIMDFQLIKATLAGKEHALVICNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKLLPVIGWSMWFSEYLFLERSWVKDENTLKSGLQRLSDYPLPFWLALFVEGTRFTQAKLLAAQEYAASTGLPVPRNTLIPRTKGFVASVSHMRSFVPAIYDMTVAIPKSSPAPTLLRLFKGQPSVVHVHIKRHLMKELPETDDSVAQWCRDIFVAKDALLDKHIAEDTFSDQEFQDIGRPIKSLVVVISWACLVIAGFIKFLQWSSLLSSWKGVAFSSFGLAIVTALMHILIRFSQSERSTPAKVVPAKKQSEQLEASNDKQH 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1322 573 MobiDBLite consensus disorder prediction 550 573 - -
Lal11g1322 573 Pfam Acyltransferase C-terminus 427 500 IPR032098 -
Lal11g1322 573 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 70 - -
Lal11g1322 573 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 269 563 - -
Lal11g1322 573 SMART plsc_2 274 396 IPR002123 GO:0016746
Lal11g1322 573 CDD LPLAT_LCLAT1-like 270 441 - -
Lal11g1322 573 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 70 - -
Lal11g1322 573 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 269 563 - -
Lal11g1322 573 Pfam Acyltransferase 270 416 IPR002123 GO:0016746
Lal11g1322 573 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 265 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1322 Lal-Chr11 16836908 16846873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1322 3 70 Miscellaneous Gene Families AT3G57650 77.941 1.72e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1322 K13523 - gmx:100812696 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1322 11 16836908 16846873 Lal11g1322 11 16836908 16846873 ECH
Lal11g1322 11 16836908 16846873 Lal20g0247 20 1753709 1761412 LSH